2017 back to top

T. Terekawa, S. Bisht, J.M. Eeftens, C. Dekker, C.H. Haering, E.C. Greene
The condensin complex is a mechanochemical motor that translocates along DNA
Science, submitted

S. Deshpande, A. Birnie, C. Dekker
On-chip density-based purification of liposomes
biomicrofluidics, in print

Y. Kabiri, A.N. Ananth, J. van der Torre, A. Katan, J.-Y. Hong, S. Malladi, J. Kong, H. Zandbergen, C. Dekker
Distortion of DNA origami on graphene imaged with advanced TEM techniques
Small, in print

R. Vlijm, S. H. Kim, P. de Zwart, Y. Dalal, C. Dekker
The supercoiling state of DNA determines the handedness of both H3 and CENP-A nucleosomes
Nanoscale, 9, 1862 – 1870 (2017) PDF

2016 back to top

L. Restrepo-Pérez, S. John, A. Aksimentiev, C. Joo, C. Dekker
SDS-Assisted Protein Transport Through Solid-State Nanopores
Nanoscale, submitted

J. Wiktor, M. van der Does, L. Buller, D.J. Sherratt, C. Dekker
Promiscuous recombination due to loss of DNA degradation by the RecBCD complex
submitted

Yaron Caspi and Cees Dekker
Mapping out Min protein patterns in fully confined fluidic chambers
eLife (2016), in press, doi:10.7554/eLife.19271 pdf

A.W. Bisson-Filho, Y.-P. Hsu, G.R. Squyres, E. Kuru, F. Wu, C. Jukes, C. Dekker, S. Holden, M.S. VanNieuwenhze, Y.V. Brun, E.C. Garner
Treadmilling by FtsZ filaments drives peptidoglycan synthesis and bacterial cell division
Science, in print for Feb.17

D.R. Burnham, B. Nijholt, I. De Vlaminck, J. Quan, T. Yusufzai, C. Dekker
Annealing helicase HARP closes RPA-stabilised DNA bubbles non-processively
Nucl. Acid Res., in print

S. Pud, S.-H. Chao, M. Belkin, D. Verschueren, T. Huijben, C. van Engelenburg, Cees Dekker, A.. Aksimentiev
Mechanical Trapping of DNA in a Double-Nanopore System
Nano Lett. 16, 8021 (2016) PDF

S.H. Kim, R. Vlijm, J. van der Torre, Y. Dalal, C. Dekker
CENP-A and H3 nucleosomes display a similar stability to force-mediated disassembly
Plos One 11, e0165078 (2016) PDF

M. Ganji, S. H. Kim, J. van der Torre, E. Abbondanzieri, C. Dekker
Intercalation-based single-molecule fluorescence assay to study DNA supercoil dynamics
Nano Lett. 16, 4699 (2016) PDF

Y. Nechemia-Arbely, D. Fachinetti, K. H. Miga, N. Sekulic, G. Soni, A. Karwei Wong, A. Young Lee, K. Nguyen, C. Dekker, B. Ren, B. E. Black, D. W. Cleveland
Human centromeric CENP-A-containing chromatin is a homotypic, octameric nucleosome with loosely held DNA termini at all cell cycle points
J Cell Biol., in print

J. Wiktor, C. Lesterlin, D. J. Sherratt, C. Dekker
CRISPR-mediated control of the bacterial initiation of replication
Nucleic Acids Research, 44, 3801-10 (2016) PDF

S.J. Heerema and C. Dekker
Graphene nanodevices for DNA sequencing
Nature Nanotechn. 11, 127–136 (2016) PDF

F. Wu, J. Halatek, M Reiter, E. Kingma, E. Frey, C. Dekker
Multistability and dynamic transitions of intracellular Min protein patterns
Molecular Systems Biology, 12, 837 (2016) PDF

J.M. Eeftens, A.J. Katan, M. Kschonsak, M. Hassler, L. de Wilde, E.M. Dief, C. Haering, C. Dekker
Condensin Smc2–Smc4 dimers are flexible and dynamic
Cell Reports, 14, 1813-8 (2016) PDF

F. Wu, C. Dekker
Nanofabricated structures and microfluidic devices for bacteria: from techniques to biology
Chem. Soc. Rev., 45, 268-280 (2016) PDF

S. Deshpande, Y. Caspi, A. Meijering, C. Dekker
Octanol-assisted liposome assembly: A robust method to produce liposomes on chip
Nature Commun. 7, 10447 (2016) PDF

C. Plesa, D. Verschueren, J.W. Ruitenberg, M.J. Witteveen, M.P. Jonsson, A.Y. Grosberg, Y. Rabin, C. Dekker
Direct observation of DNA knots using solid state nanopores
Nature Nanotechn.  11, 1093–1097 (2016) PDF

F.J.H. Hol, O. Rotem, E. Jurkevitch, C. Dekker, D.A. Koster
Predator-prey dynamics in micro-scale patchy landscapes
Proc. Roy. Soc. B 283, 20152154 (2016)

2015 back to top

S. Pud, D. Verschueren, N. Vukovic, C. Plesa, M.P. Jonsson,C. Dekker
Self-aligned plasmonic nanopores by optically controlled dielectric breakdown
Nano Lett. 15, 7112-7 (2015) PDF

F. Wu, B.G.C. van Schie, J. E. Keymer, C. Dekker
Symmetry and scale orient Min protein patterns in shaped bacterial sculptures
Nature Nanotechn. 10, 719–726 (2015) PDF SI videos News and Views On The Cover

S. McGinn et al
New Technologies for DNA analysis
New Biotechnology, 33, 311 (2016) PDF

C. Plesa, N. van Loo,C. Dekker
DNA nanopore translocation in glutamate solutions
Nanoscale 7, 13605-13609 (2015) PDF

J. Eeftens, J. van der Torre, D.R. Burnham, C. Dekker
Copper-free click chemistry for attachment of biomolecules in magnetic tweezers
BMC Biophys. 8, 9 (2015) PDF

M. Belkin, S.-H. Chao, M. Jonsson, C. Dekker, A. Aksimentiev
Plasmonic nanopores for trapping, controlling displacement, and sequencing of DNA
ACS Nano,9, 10598–10611 (2015) PDF

F. Wu, E. van Rijn, B.G.C. van Schie, J.E. Keymer, C. Dekker
Multicolor imaging of the bacterial nucleoid and cell division proteins with blue, orange, and near-infrared fluorescent proteins
Frontiers Microbiol., 6, 607 (2015) PDF

L. Vicarelli, S.J. Heerema, C. Dekker, H.W. Zandbergen
Controlling defects in graphene for optimizing the electrical properties of graphene nanodevices
ACS Nano 4, 3428 (2015) PDF

R. Vlijm, A. Mashaghi, S. Bernard, M. Modesti, C. Dekker
Experimental phase diagram of negatively supercoiled DNA measured by magnetic tweezers and fluorescence,
Nanoscale 7, 3205-3216 (2015) PDF

M. Muthukumar, C. Plesa, C. Dekker
Single-molecule sensing with nanopores
Physics Today 68, 40 (2015) Physics Today
On The Cover

S.J. Heerema, G.F. Schneider, M. RozemullerL. VicarelliH. W. Zandbergen and C. Dekker
1/f noise in graphene nanopores
Nanotechn. 26, 074001 (2015) PDF

C. Plesa, C. Dekker
Data analysis methods for solid-state nanopores
Nanotechn. 26, 084003 (2015) PDF

R. Vlijm, M. Lee, O. Ordu, A. Boltengagen, A. Lusser, N.H. Dekker, C. Dekker
Comparing the assembly and handedness dynamics of (H3.3-H4)2 tetrasomes to canonical tetrasomes
Plos One 10, e0141267 (2015) PDF

C. Plesa, J.W. Ruitenberg, M.J. Witteveen, C. Dekker
Detection of individual proteins bound along DNA using solid state nanopores
Nano Lett., 15, 3153–3158 (2015) PDF

F.J.H. Hol, B. Hubert, C. Dekker, J.E. Keymer
Density dependent adaptive resistance allows swimming bacteria to colonize an antibiotic gradient
Int. Soc. Microb. Ecol. J. 10, 30 (2015) Advance Online Publication

C. Plesa, N. van Loo, P. Ketterer, H. Dietz, C. Dekker
Velocity of DNA during translocation through a solid state nanopore
Nano Lett. 15 , 732–737 (2015) PDF

T.R. Blosser, L. Loeff, E.R. Westra, M. Vlot, T. Künne, M. Sobota, C. Buyzerd, C. Dekker, S.J.J. Brouns, C. Joo
Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex
Molec. Cell 58, 60–70 (2015) PDF

Y. Li, F. Nicoli, C. Chen, L. Lagae, G. Groeseneken, T. Stakenborg, C. Dekker, P. Van Dorpe, M.P. Jonsson
Photoresistance Switching of Plasmonic Nanopores
Nano Lett. 15, 776–782 (2015) PDF

R. Vlijm, M. Lee, J. Lipfert, A. Lusser, C. Dekker, N.H. Dekker
Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes
Cell Reports 10, 216 – 225 (2015) PDF

A.C. Ferrari et al
Science and technology roadmap for graphene, related two-dimensional crystals, and hybrid systems
Nanoscale 7, 4598-4810 (2015) PDF

F. J.H. Hol, P. Galajda, R.G. Woolthuis, C. Dekker, J.E. Keymer
The idiosyncrasy of spatial structure in bacterial competition
BMC research notes, 8, 245 (2015)

2014 back to top

F.J.H. Hol and C. Dekker
Zooming in to see the bigger picture: using nanofabrication to study bacteria
Science 346, 1251821 (2014) PDF

F. Nicoli, D. Verschueren, C. Dekker, M. P. Jonsson
DNA Translocation through Solid-State Plasmonic Nanopores
Nano Lett. 14, 6917–6925 (2014)

D.R. Burnham, I. De Vlaminck, T. Henighan, C. Dekker
Skewed Brownian fluctuations in single-molecule magnetic tweezers
Plos One 9, e108271 (2014) PDF

J.W.J. Kerssemakers, T.R. Blosser, C. Dekker
A simple self-calibrating method to measure the height of fluorescent molecules and beads with nanometer resolution
Nano Lett. 14, 4469 (2014) PDF

A.J. Katan, R. Vlijm, A. Lusser, C. Dekker
Dynamics of nucleosomal structures measured by high-speed Atomic Force Microscopy
Small 8, 976–984 (2014) PDF

Y. Caspi and C. Dekker
Divided we stand: splitting synthetic cells for their proliferation
Systems and Synthetic Biology 8, 249-269 (2014) PDF

FJH Hol, MJ Voges, C Dekker, JE Keymer
Nutrient-responsive regulation determines biodiversity in a colicin-mediated bacterial community
BMC Biology, 12:70 (2014) PDF

A. Mashaghi and C. Dekker
Systems and synthetic biology approaches to cell division
Systems and Synthetic Biology 8, 173–178 (2014) PDF

2013 back to top

A. Mashaghi, A. Katan
A physicist’s view of DNA
De Physicus, 24e, 3, 59-61 (2013) PDF

C. Plesa, A. Ananth, V. Linko, C. Gülcher, A. Katan, H. Dietz, C. Dekker
Ionic permeability and mechanical properties of DNA origami nanoplates on solid-state nanopores
ACS Nano 8, 35–43 (2014) PDF

C. Plesa, L. Cornelissen, M.W. Tuijtel, C. Dekker
Non-equilibrium folding of individual DNA molecules recaptured up to 1000 times in a solid state nanopore
Nanotechnology 24, 475101 (2013) PDF

F. J.H. Hol, P. Galajda, K. Nagy, R.G. Woolthuis, C. Dekker, J.E. Keymer
Spatial structure facilitates cooperation in a social dilemma: empirical evidence from a bacterial community
Plos One, 8: e77042. doi:10.1371/journal.pone.0077042 (2013) PDF

G.F. Schneider, Q. Xu, S. Hage, S. Luik, J.N.H. Spoor, S. Malladi, H. Zandbergen C. Dekker
Tailoring the hydrophobicity of graphene nanopores
Nature Communications 4, 2619 (2013) PDF

M.T.J. van Loenhout, I. De Vlaminck, B. Flebus, J.F. den Blanken, L. Zweiffel, K.M. Hooning, J.W.J. Kerssemakers, C. Dekker
Scanning a DNA molecule for bound proteins using hybrid magnetic and optical tweezers
Plos One 8, e65329 (2013) PDF

C. Plesa, S.W. Kowalczyk, R. Zinsmeester, A. Y. Grosberg, Y. Rabin, C. Dekker
Fast Translocation of Proteins through Solid State Nanopores
Nano Lett. 13, 658 (2013) PDF

M.P. Jonsson , C. Dekker
Electrical Profiling of Optical Intensity Landscapes with a Plasmonic Nanopore
Nano Lett. 13, 1029 (2013) PDF

G.V. Soni, M.P. Jonsson , C. Dekker
Periodic modulation of optical tweezers near solid-state membranes
Small 9, 679 (2013) PDF

Q. Xu, M.Y. Wu, G. Schneider, L. Houben, S. Malladi, C. Dekker, E. Yucelen, R. E. Dunin-Borkowski, H.W. Zandbergen
Controllable Atomic Scale Patterning of Freestanding Monolayer Graphene at Elevated Temperature
ACS Nano 7, 1566-1572 (2013) PDF

2012 back to top

V.E. Calado, G.F. Schneider, A.M.M.G. Theulings, C. Dekker, L.M.K. Vandersypen
Formation and control of wrinkles in graphene by the wedging transfer method
Appl. Phys. Lett. 101, 103116 – 103116-3 (2012) PDF

M.T.J. van Loenhout, M.V. de Grunt, C. Dekker
Dynamics of DNA supercoils
Science, 338, 94-97 (2012) PDF
Videos: http://ceesdekkerlab.nl/downloads/

X.J.A. Janssen, M.P. Jonsson, C. Plesa, G.V. Soni, C. Dekker, N.H. Dekker
Rapid manifacturing of low-noise membranes for nanopore sensors by Trans-chip Illumination Lithography
Nanotechnology 23, 475302 (2012) PDF

S.W. Kowalczyk and C. Dekker
Measurement of the docking time of a DNA molecule onto a solid-state nanopore
Nano Lett. 12, 4159-63 (2012) PDF

G.V. Soni and C. Dekker
Detection of Nucleosomal Substructures using Solid State Nanopores
Nano Lett. 12, 3180 (2012) PDF

F. Hol and C. Dekker
Bacteriën in nanokanalen en micro-steden
Ned. Tijdschr. Natuurk. 78, 240 (2012)

G. Schneider and C. Dekker
DNA sequencing with nanopores
Nature Biotechn. 30, 326 (2012) PDF

C. Dekker
Als fysicus aan de slag in de nanobiologie
Ned. Tijdschr. Natuurk. 78, 286 (2012)

S.W. Kowalczyk and C. Dekker
Salt and voltage dependence of the conductance blockade induced by translocation of DNA and RecA filaments through solid-state nanopores
in ‘Nanopores for bioanalytical applications’, Edited by J. Edel and T. Albrecht (Royal Society Chemisty, 2012)

R. Vlijm, J. S.J. Smitshuijzen, A. Lusser, C. Dekker
NAP1-assisted nucleosome assembly on DNA measured in real time by single-molecule magnetic tweezers
PLOS One 7, e46306 (2012) PDF

I. De Vlaminck and C. Dekker
Recent Advances in Magnetic Tweezers
Ann. Rev. Biophys. 41, 453 (2012) PDF

I. De Vlaminck, Th. Henighan, M.T.J. van Loenhout, D. Burnham, C. Dekker
Magnetic forces and DNA mechanics in multiplexed magnetic tweezers
PLOS One 7, e41432 (2012) PDF

J. Männik, F. Wu, F.J.H. Hol, P. Bissichia, D. Sherratt, J.E. Keymer, C. Dekker
Robustness and accuracy of cell division in Escherichia coli in diverse cell shapes
Proc. Natl. Acad. Sci. (USA) 109, 6957 (2012) PDF

M.T.J. van Loenhout, J. Kerssemakers , I. De Vlaminck, C. Dekker
Non-bias-limited tracking of spherical particles, enabling nanometer resolution at low magnification
Biophys. J. 102, Issue 10, 2362 (2012) PDF
Software: http://ceesdekkerlab.nl/downloads/

I. De Vlaminck, M. T.J. van Loenhout, L. Zweifel, J. den Blanken, K. Hooning, S. Hage, J. Kerssemakers, C. Dekker
Mechanism of homology recognition in DNA recombination from dual-molecule experiments
Molec. Cell 46, 616 (2012) PDF

S.W. Kowalczyk, D.B. Wells, A. Aksimentiev, C. Dekker
Slowing down DNA translocation through a nanopore in lithium chloride
Nano Lett.,12, 1038 (2012) PDF

A.R. Hall, J.M. Keegstra, M.C. Duch, M.C. Hersam, C. Dekker
Measuring Single-Wall Carbon Nanotubes with Solid-State Nanopores
Book chapter in ‘Nanopore-based technology: single molecule characterization and DNA sequencing’, (Ed. M. Gracheva,; Humana Press, 2011) as the volume on “Nanopore Sequencing technology” in the series ‘Methods in Molecular biology ‘ (series editor J.M. Walker) Volume 870, 2012, DOI: 10.1007/978-1-61779-773-6, p. 227-239 (2012)

2011 back to top

I. De Vlaminck, Th. Henighan, M.T.J. van Loenhout, I. Pfeiffer, J. Huijts, J. Kerssemakers, A. Katan, A. van Langen-Suurling, E. van der Drift, Claire Wyman, C. Dekker
Highly parallel magnetic tweezers by targeted DNA tethering
Nano Lett. 11, 5489 (2011) PDF

A.J. Katan and C. Dekker
High-speed AFM reveals the dynamics of single biomolecules at the nanometer scale
Cell 147, 979-982 (2011) PDF

S.W. Kowalczyk and C. Dekker
Nanogaatjes voor DNA-analyse
Nederlands Tijdschrift voor Natuurkunde, 77(5), 2011 PDF

S.W. Kowalczyk, A.Y. Grosberg, Y. Rabin, C. Dekker
Modeling the conductance and DNA blockade of solid-state nanopores
Nanotechnology 22 (2011) 315101. PDF Supplementary Material

A.R. Hall, J. M. Keegstra, M. C. Duch, M. C. Hersam, C. Dekker
Translocation of Single-Wall Carbon Nanotubes Through Solid-State Nanopores
Nano Lett., 11, 2446-50 (2011) PDF

Stefan W. Kowalczyk, Timothy R. Blosser, Cees Dekker
Biomimetic nanopores: learning from and about nature
Trends in Biotechnology. 29, 607-614 (2011) PDF

B. Song, G.F. Schneider, Q. Xu, G. Pandraud, C. Dekker, H. Zandbergen
Atomic-scale electron-beam sculpting of defect-free graphene nanostructures
Nano Lett., 11, 2247–2250 (2011) PDF

A.R. Hall and C. Dekker
Molecular Detection and Force Spectroscopy in Solid-State Nanopores with Integrated Optical Tweezers
Book chapter to be published in ‘Nanopores: Sensing Fundamental Biological Interactions at the Single Molecule Level’ (Eds. R. Bashir, S. Iqbal; Springer, 2011).

J.T. Holthausen, M. van Loenhout, H. Sanchez, D. Ristic, S.i van Rossum-Fikkert, M. Modesti, T. Thorslund, S.C. West, C. Dekker, R. Kanaar, C. Wyman
Effect of the BRCA2 CTRD domain on RAD51 filaments analyzed by an ensemble of single molecule techniques
Nucl. Acid Res.39, 6558 (2011) PDF

S.W. Kowalczyk, L. Kapinos, T.R. Blosser, T. Magalhaes, P. van Nies,R.Y.H. Lim, C. Dekker
Single-molecule transport across an individual biomimetic nuclear pore complex
Nature Nanotechnology 6, 433–438 (2011). PDF Supplementary Material

2010 back to top

J. Männik, F. Sekhavati, J. E. Keymer, C. Dekker
Bacteria in submicron channels and microvalves
Proc. μTAS2010 (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences, 3-7 October 2010, Groningen, The Netherlands), p. 1376-1378 (2010) PDF

A .R. Hall,  J.M. Keegstra, M.C. Duch, M.C. Hersam, C. Dekker
Measuring Single-Wall Carbon Nanotubes with Solid-State Nanopores
Book chapter to be published in ‘Nanopore-based technology: single molecule characterization and DNA sequencing’, (Ed. M. Gracheva,; Humana Press, 2011) as the volume on “Nanopore Sequencing technology” in the series ‘Methods in Molecular biology ‘ (series editor J.M. Walker)

I. Heller, S. Chatoor, J. Männik, M.A.G. Zevenbergen, C. Dekker, S.G. Lemay
Influence of electrolyte composition on liquid-gated carbon-nanotube and graphene transistors
J. Am. Chem. Soc. 132, 17149–17156 (2010) PDF

G.F. Schneider, S.W. Kowalczyk, V. E. Calado, G. Pandraud, H. Zandbergen, L.M.K. Vandersypen, C. Dekker
DNA translocation through graphene nanopores
Nano Lett., 10, 3163–3167 (2010) PDF

A.R. Hall, A. Scott, D. Rotem, K.l Mehta, H. Bayley, C. Dekker
Hybrid pore formation by directed insertion of alpha hemolysin into solid-state nanopores
Nature Nanotechnology 5, 874–877 (2010) PDF

G.F. Schneider, V.E. Calado, H. Zandbergen, L.M.K. Vandersypen, C. Dekker
Wedging transfer of nanostructures
Nano Lett. 10, 1912–1916 (2010) PDF

S.W. Kowalczyk, M.W. Tuijtel, S.P. Donkers, C. Dekker
Unraveling Single-Stranded DNA in a Solid-State Nanopore
Nano Lett 10, 1414–1420 (2010) PDF

J. Männik, F. Sekhavati, J. E. Keymer, C. Dekker
Bacteria in submicron channels and microvalves
Proc. μTAS2010 (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences, 3-7 October 2010, Groningen, The Netherlands), p. 1376-1378 (2010) PDF

I. De Vlaminck, I. Vidic, M. van Loenhout, R. Kanaar, J.H.G. Lebbink, C. Dekker
Torsional regulation of hRPA-induced unwinding of double stranded DNA
Nucl. Acid Res. 38, 4133-4142 (2010) PDF

M. van den Hout, A.R. Hall, M.-Y. Wu, H.W. Zandbergen, C. Dekker, N.H. Dekker
Controlling Nanopore Size, Shape, and Stability
Nanotechnology 21, 115304 (2010) PDF

I. Heller, S. Chatoor, J. Männik, M.A.G. Zevenbergen, J.B. Oostinga, A.F. Morpurgo, C. Dekker, S.G. Lemay
Charge Noise in Graphene Transistors
Nano Lett. 10, 1563–1567 (2010) PDF

S.W. Kowalczyk, A.R. Hall, C. Dekker
Detection of local protein structures along DNA using solid-state nanopores
Nano Lett. 10, 324–328 (2010) PDF

I. Dujovne, J. Kerssemakers, G. Cappello, C. Dekker
Interference technique for minimally invasive, subnanometer, microsecond measurements of displacements
Rev. Sci. Instrum. 81, 016103 (2010) PDF

D. Stein, Z. Deurvorst, F.H.J. van der Heyden, W.J.A. Koopmans, A. Gabel, C. Dekker
Electrokinetic Concentration of DNA Polymers in Nanofluidic Channels
Nano Lett. 10, 765–772 (2010) PDF

2009 back to top

A.R. Hall, S. van Dorp, S.G. Lemay, C. Dekker
Electrophoretic Force on a Protein-Coated DNA Molecule in a Solid-State Nanopore
Nano Letters 9, 4441-4445 (2009) PDF

I. Heller, W.T.T. Smaal, S.G. Lemay, C. Dekker
Probing macrophage activity with carbon nanotube sensors
Small 5, 2528-2532 (2009) PDF

I.Heller, S. Chatoor, J. Männik, M. A. G. Zevenbergen, C. Dekker, S. G. Lemay
Comparing the weak and strong gate-coupling regimes for nanotube and graphene transistors
Physica Status Solidi – Rapid Research Letters 3, 190 – 192 (2009) PDF

D. Stein, M.G.L. van den Heuvel, C. Dekker
Transport of ions, DNA polymers, and microtubules in the nanofluidic regime
Book chapter in ‘Nanofluidics: nanoscience and nanotechnology’, edited by J.B. Edel and A.J. deMello (RSC Publ, Cambridge, 2009), p. 1-30 PDF

M.T.J. van Loenhout, T. van der Heijden, R. Kanaar, C. Wyman, C. Dekker
Dynamics of RecA filaments on single stranded DNA
Nucleic Acids Research 37, 4089-4099 (2009) PDF

J. Männik, R. Driessen, P. Galajda, J. E. Keymer, C. Dekker
Bacterial Growth and Motility in Sub-Micron Constrictions
Proceedings of the National Academy of Sciences
, 106 (35), 14861-6 (2009) PDF

G.M. Skinner, M. van den Hout, O. Broekmans, C. Dekker, N.H. Dekker
Distinguishing Nucleic Acids Using Solid-State Nanopores
Nano Letters, 9 (8), 2953-2960 (2009) PDF Supporting Information

S. van Dorp, U.F. Keyser, N.H. Dekker, C. Dekker, Serge G. Lemay
Origin of the electrophoretic force on DNA in solid-state nanopores
Nature Physics 5
, 347-351 (2009) PDF

R.M.M. Smeets, N.H. Dekker, C. Dekker
Low Frequency Noise in Solid-State Nanopores
Nanotechnology
, 20, 095501, (2009) PDF

I. Heller, J. Mannik, S.G. Lemay, C. Dekker
Optimizing the Signal-to-Noise Ratio for Biosensing with Carbon Nanotube Transistors
Nano Letters 9
, 377-382 , (2009) PDF

M.Y. Wu, R.M.M Smeets, M. Zandbergen, U. Ziese, D. Krapf, P.E. Batson, N.H. Dekker, C. Dekker, H.W. Zandbergen
Control of Shape and Material Composition of Solid-State Nanopores
Nano Letters 9
, 479-484 , (2009) PDF

R.M.M Smeets, S.W. Kowalczyk, A.R. Hall, N.H. Dekker, C. Dekker
Translocation of RecA-coated Double-Stranded DNA Through Solid-State Nanopores
Nano Letters, 9 (9): 3089-3095 (2009) PDF

2008 back to top

F.J.M. Hoeven, F.S. Meijer, C. Dekker, S.P.J. Albracht, H.A. Heering, S.J. Lemay
Towards single-enzyme voltammetry: [NiFe]-hydrogenase protein film voltammetry at nanoelectrodes
ACS Nano 2 , 2497–2504 (2008)

E. Šišáková, M. Weiserová, C. Dekker, R. Seidel, M. D. Szczelkun
The Interrelationship of Helicase and Nuclease Domains during DNA Translocation by the Molecular Motor EcoR124I
J. Mol. Biol. 384, 1273–1286 (2008)

M.G.L. van den Heuvel, R. Bondesan, M. Cosentino Lagomarsino, C. Dekker
Single-molecule observation of anomalous electro-hydrodynamic orientation of microtubules
Phys. Rev. Lett.. 101, 118301 (2008)

P. McEuen and C. Dekker
Synthesizing the future
ACS Chemical Biology 3, 10–12 (2008)

I. Dujovne, M. van den Heuvel, Y. Shen, M. de Graaff, C. Dekker
Velocity Modulation of Microtubules in Electric Fields
Nano Letters
, 8 (12), 4217-4220, (2008) PDF

M. van den Hout, S. Hage, C. Dekker, N.H. Dekker
End-Joining Long Nucleic Acid Polymers
Nucleic Acids Research 36
,e104 , (2008) PDF

D.J. Bonthuis, C. Meyer, D. Stein, C. Dekker
Conformation and dynamics of DNA confined in slit-like nanofluidic channels
Phys. Rev. Lett. 101, 108303 (2008)

T. van der Heijden and C. Dekker
Monte Carlo simulations of protein assembly, disassembly, and linear motion on DNA
Biophysical Journal
, doi:10.1529/biophysj.108.135061, (2008) PDF Monte Carlo code

T. van der Heijden, M. Modesto, S. Hage, R. Kanaar, C. Wyman, C. Dekker
Homologous recombination in real time: DNA strand exchange by RecA
Molecular Cell
, 30, 530-538 (2008) PDF Supplementary Material

F.J.M. Hoeben, I. Heller, S.P.J. Albracht, C. Dekker, S.G. Lemay, H.A. Heering
Polymyxin-coated Au and carbon nanotube electrodes for stable [NiFe]-hydrogenase film voltammetry
Langmuir, 24, 5925-5931 (2008) PDF

J. Männik, I. Heller, A.M. Jannsens, S.G. Lemay, C. Dekker
Charge noise in liquid-gated single-wall carbon nanotube Transistors
Nano Letters 8 (2), 685-688 (2008) PDF

M.G.L. van den Heuvel, M.P. de Graaff, C. Dekker
Microtubule curvatures under perpendicular electric forces reveal a low persistence length
Proceedings of the National Academy of Sciences, 105: 7941-6, (2008) PDF

I. Heller, A. M. Janssens, J. Männik, E. D. Minot, S. G. Lemay, C. Dekker
Identifying the Mechanism of Biosensing with Carbon Nanotube Transistors
Nano Letters 8 (2), 591-595 (2008) PDF

R. Smeets, U. F. Keyser, N. H. Dekker, C. Dekker
Noise in Solid-state Nanopores
Proceedings of the National Academy of Sciences
105: 417-421 (2008) PDF

2007 back to top

M.G.L. van den Heuvel, S. Bolhuis, C. Dekker
Persistance length measurement from stochastic single-molecule trajectories
Nano Letters
7: 3138-3144 (2007) PDF

E.D. Minot, A.M. Janssens, I. Heller, H.A. Heering, C. Dekker, S. G. Lemay
Carbon nanotube biosensors: the critical role of the reference electrode
Applied Physics Letters
91: 093507/1-093507/3 (2007): doi: 10.1063/1.2775090 PDF

T. van der Heijden, R. Seidel, M. Modesti, R. Kanaar, C. Wyman, C. Dekker
Real-time assembly and disassembly of human RAD51 filaments on individual DNA molecules
Nucleic Acids Research 35: 5646-5657 (2007): doi: 10.1093/nar/gkm629 (2007) PDF

B.J. LeRoy, I. Heller, V.K. Pahilwani, C. Dekker, S.G. Lemay
Simultaneous electrical transport and scanning tunneling spectroscopy of carbon nanotubes
Nano Letters : Accepted (2007) PDF

M.G.L. van den Heuvel, C. Dekker
Motor Proteins at Work for Nanotechnology
Science 317: 333-336 (2007) PDF

F.H.J. van der Heyden, D.J. Bonthuis, D. Stein, C. Meyer, C. Dekker
Power Generation by Pressure-Driven Transport of Ions in Nanofluidic Channels
Nano Letters 7: 1022-1025 (2007) PDF

M. Modesti, D. Ristic, T. van der Heijden, C. Dekker, J. van Mameren, E.J.G. Peterman, G.J.L. Wuite, R. Kanaar, C. Wyman
Fluorescent Human RAD51 Reveals Multiple Nucleation Sites and Filament Segments Tightly Associated along a Single DNA Molecule
Structure
15: 599-609 (2007) PDF

T. van der Heijden, F. Moreno-Herrero, R. Kanaar, C. Wyman, C. Dekker
AFM Tip-Induced Dissociation of RecA-dsDNA Filaments
NanoLetters
7 (4): 1112 (2007) PDF

C. Dekker
Solid-State Nanopores
Nature Nanotechnology 2 (4): 209-215 (2007) PDF

High flexibility of DNA on short length scales probed by atomic force microscopy P.A. Wiggins, T. Van der Heijden, F. Moreno-Herrero, A. Spakowitz, R. Phillips, J. Widom, C. Dekker, P.C. Nelson Nature Nanotechn. 1, 137-141 (2006)

M.G.L. van den Heuvel, M.P. de Graaff, S.G. Lemay, C. Dekker
Electrophoresis of individual Microtubules in Microchannels
Proceedings of the National Academy of Science USA 104 (19): 7770-7775 (2007) PDF

2006 back to top

M.G.L. van den Heuvel, M.P. de Graaff, C. Dekker
Op afstand bestuurbare eiwit
Nederlands Tijdschrift voor Natuurkunde, 1-4 September 2006 PDF

P.A. Wiggins, T. van der Heijden, F.Moreno-Herrero, A. spakowitz, R. Phillips, J. Widom, C. Dekker, P.C. Nelson
High flexibility of DNA on short length scales probed by atomic force microscopy
Nature Nanotechnology
1(): 137-141 (2006) PDF

T. van der Heijden, F. Moreno-Herrero, R. Kanaar, C. Wyman, C. Dekker
Comment on: “Direct and Real-Time Visualization of the Disassembly of a Single RecA-DNA-ATP S Complex Using AFM Imaging in Fluid”
Nano Letters (1): 137-141 (2006) PDF

U. F. Keyser, J. van der Does, C. Dekker, N.H. Dekker
Optical tweezers for force measurements on DNA in nanopores
Review of Scientific Instruments
77 (10): Art. No. 105105 (2006) PDF

F.H.J. van der Heyden, D.J. Bonthuis, D. Stein, C. Meyer, C. Dekker
Electrokinetic energy conversion effciency in nanofluidic channels
Nano Letters
6 (10): 2232-2237 (2006) PDF

H. A. Heering, K.A. Williams, S. de Vries, C. Dekker
Specific Vectorial Immobilization of Oligonucleotide-Modified Yeast Cytochrome c on Carbon Nanotubes
ChemPhysChem
7 (8): 1705-1709 (2006) PDF

D. Krapf, B.M. Quinn, M.-Y. Wu, H.W. Zandbergen, C. Dekker, S.G. Lemay
Experimental observation of nonlinear ionic transport at the nanometer scale
Nano Letters
6 (11): 2531-2535 (2006) PDF

R.M.M. Smeets, U.F. Keyser, M.Y. Wu, N.H. Dekker, C. Dekker
Nanobubbles in solid-state nanopores
Physical Review Letters
97 (8): Art. No. 088101 (2006) PDF

U.F. Keyser, B.N. Koeleman, D. Krapf, R.M.M. Smeets, S.G. Lemay, N.H. Dekker, C. Dekker
Direct force measurements on DNA in a solid-state nanopore
Nature Physics
2 (7): 473-477 (2006) PDF

I. Heller, J. Kong, K. A. Williams, C. Dekker, S.G. Lemay
Electrochemistry at Single-Walled Carbon Nanotubes: The Role of Band Structure and Quantum Capacitance
Journal of the American Chemical Society
128 (22): 7353-7359 (2006) PDF

L.K. Stanley, R. Seidel, C. van der Scheer, N.H. Dekker, M.D. Szczelkun, C. Dekker
When a helicase is not a helicase: dsDNA tracking by the motor protein EcoR124I
EMBO Journal
25 (10): 2230-2239 (2006) PDF

P.D. Jarillo-Herrero, J.Kong, H.S.J. van der Zant, C. Dekker, L.P. Kouwenhoven, S. De Franceschi
Tunable orbital pseudospin and multi-level Kondo effect in carbon nanotubes
Properties of Novel Nanostructures AIP conference proceedings H Kuzmany, J Fink, M Mehring, & S Roth (Eds.) 786: 482-489 (2005) Kirchberg, Austria: AIP.

M.G.L. van den Heuvel, M.P. de Graaff, C. Dekker
Molecular sorting by electrical steering of microtubules in kinesin-coated channels
Science
312 (5775): 910-914 (2006) PDF

D. Stein, F.H.J. van der Heyden, W. Koopmans, C. Dekker
Pressure-driven transport of DNA polymers confined in fluidic channels
Proceedings of the National Academy of Science USA 103 (43): 15853-15858 (2006) PDF

F.H.J. van der Heyden, D. Stein, K. Besteman, S.G. Lemay, C. Dekker
Charge inversion at high ionic strength studied by streaming currents
Physical Review Letters
96 (22): Art. No. 224502 (2006) PDF

R.M.M. Smeets, U.F. Keyser, D. Krapf, M.Y. Wu, N.H. Dekker, C. Dekker
Salt dependence of ion transport and DNA translocation through solid-state nanopores.
Nano Letters
6 (1): 89-95 (2006) PDF

S. Sapmaz, P. Jarillo-Herrero, Ya. M. Blanter, C. Dekker, and H.S.J. van der Zant
Tunneling in suspended carbon nanotubes assisted by stretching modes
Physical Review Letters
96 (2): Art. No. 026801 (2006) PDF

D. Krapf, M.Y. Wu, R. M. M. Smeets, H. W. Zandbergen, C. Dekker, S.G. Lemay
Fabrication and Characterization of Nanopore-Based Electrodes with Radii down to 2 nm.
Nano Letters
6 (1): 105-109 (2006) PDF

2005 back to top

F. Moreno-Herrero, L. Holtzer, D. Koster, S. Shuman, C. Dekker, N.H. Dekker
Atomic force microscopy shows that vaccinia topoisomerase IB generates filaments on DNA in a cooperative fashion
Nucleic Acids Research
33 (18): 5945-5953 (2005) PDF

F. Moreno-Herrero, M. de Jager, N. H. Dekker, R. Kanaar, C. Wyman, C. Dekker
Meso-scale conformational changes in Rad50/Mre11 upon DNA binding: implications for DNA tethering
Nature
437 (7057): 440-443 (2005) PDF Movie 1 & Movie 2

R. Seidel, J. G. P. Bloom, J. van Noort, C. F. Dutta, N. H. Dekker, K. Firman, M. D. Szczelkun, C. Dekker
Dynamics of initiation, termination and reinitiation of DNA translocation by the motor protein EcoR124I
EMBO Journal
24 (23): 4188-4197 (2005) PDF

F.H.J. van der Heyden, D. Stein, C. Dekker
Streaming currents in a single nanofluidic channel
Physical Review Letters
95 (11): Art. No. 116104 () PDF

U.F. Keyser, D. Krapf, B. N. Koeleman, R. M. M. Smeets, N. H. Dekker, C. Dekker
Nanopore tomography of a laser focus
Nano Letters
5 (11): 2253-2256 (2005) PDF

M.G.L. van den Heuvel, C.T. Butcher, R.M.M. Smeets, S. Diez, C. Dekker
High Rectifying Efficiencies of Microtubule Motility on Kinesin-Coated Gold Nanostructures
Nano Letters
5 (6): 1117-1122 (2005) PDF

D. Ristic, M. Modesti, T. van der Heijden, S.J.T. van Noort, C. Dekker, R. Kanaar, C. Wyman
Human Rad51 filaments on double- and single-stranded DNA: correlating regular and irregular forms with recombination function.
Nucelic Acids Research
33 (10): 3292-3302 (2005) PDF

T. van der Heijden, J. van Noort, H. van Leest, R. Kanaar, C. Wyman, N.H. Dekker, C. Dekker
Torque-limited RecA polymerization on dsDNA
Nucleic Acids Research
33 (7): 2099-2105 (2005) PDF

B.J. LeRoy, J. Kong, V.K. Pahilwani, C. Dekker, S.G. Lemay
Three-terminal scanning tunneling spectroscopy of suspended carbon nanotubes
Physical Review B
72 (7): Art. No. 075413 (2005) PDF

B.M. Quinn, C. Dekker, S.G. Lemay
Electrodeposition of noble metals nanoparticles on carbon nanotubes
Journal of the American Chemical Society
127 (17): 6146-6147 (2005) PDF

A. J. Storm, J.H. Chen, X.S. Ling, H.W. Zandbergen, C. Dekker
Electron-beam-induced deformations of SiO2 nanostructures
Journal of Applied Physics
98 (1): Art. No. 014307 (2005) PDF

P. Jarillo-Herrero, J. Kong, H. S.J. van der Zant, C. Dekker, L. P. Kouwenhoven, S. De Franceschi
Orbital Kondo effect in carbon nanotubes
Nature
434 (7032): 484-487 (2005) PDF

D.A. Koster, V. Croquette, C. Dekker, S. Shuman, N.H. Dekker
Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB
Nature
434 (7033): 671-674 (2005) PDF

I. Heller, J. Kong, H. A. Heering, K. Williams, S. Lemay, C. Dekker
Individual single-walled carbon nanotubes as nanoelectrodes for electrochemistry
Nano Letters
5 (1) 137-142 (2005) PDF

M.G.L. van den Heuvel, C.T. Butcher, S.G. Lemay, S. Diez, C. Dekker
Electrical docking of microtubules for kinesin-driven motility in nanostructures
Nano Letters
5 (2): 235-241 (2005) PDF

J.A. Abels, F. Moreno-Herrero, T. van der Heijden, C. Dekker, N.H. Dekker
Single-Molecule Measurements of the Persistence Length of double-stranded RNA
Biophysical Journal
88 (4): 2737-2744 (2005) PDF

J. Kong, B.J. LeRoy, S.G. Lemay, C. Dekker
Integration of a gate electrode into carbon nanotube devices for scanning tunneling microscopy
Applied Physics Letters
86 (11): Art. No. 112106 (2005) PDF

S. Sapmaz, P. Jarillo-Herrero, J. Kong, C. Dekker, L.P. Kouwenhoven, H.S.J. van der Zant
Electronic excitation spectrum of metallic carbon nanotubes
Physical Review B
71 (15): Art. No. 153402 (2005) PDF

S.G. Lemay, D.M. van den Broek, A.J. Storm, D. Krapf, R.M.M. Smeets, H.A. Heering, C. Dekker
Lithographically fabricated nanopore-based electrodes for electrochemistry
Analytical Chemistry
77 (6): 1911-1915 (2005) PDF

A. J. Storm, C. Storm, J. Chen, H.W. Zandbergen, J.F. Joanny, C. Dekker
Fast DNA translocation through a solid-state nanopore
Nano Letters
5 (7): 1193 -1197 (2005) PDF

H.W. Zandbergen, B.J.H.A. van Duuren, P.F.A. Alkemade, G. Lientschnig, O.Vasquez, C. Dekker, F.D. Tichelaar
Sculpting nano-electrodes with a transmission electron beam for electrical and geometrical characterization of nanoparticles.
Nano Letters
5 (3): 549-553 (2005) PDF

A.J. Storm, J. Chen, H.W. Zandbergen, C. Dekker
Translocation of double-strand DNA through a siliconoxide nanopore
Physical Review E
71 (5): Art. No. 051903 (2005) PDF

P. Jarillo-Herrero, J. Kong, H. S.J. van der Zant, C. Dekker, L. P. Kouwenhoven, S. De Franceschi
Electronic transport spectroscopy of carbon nanotubes in a magnetic field
Physical Review Letters
94 (15): Art. No. 156802 (2005) PDF

2004 back to top

N. H. Dekker, J. A. Abels, P. T. M. Veenhuizen, C. Dekker
Joining of Long Double-stranded RNA Molecules through Controlled Overhangs
Nucleic Acids Research
32 (18): Art. No. e140 (2004) PDF

P. Jarillo-Herrero, S. Sapmaz, C. Dekker, L.P. Kouwenhoven, H.S.J. van der Zant
Electron-hole symmetry in a semiconducting carbon nanotube quantum dot
Nature
429 (6990): 389-392 (2004) PDF

S.J.T. van Noort, T. van der Heijden, C. F. Dutta, W. Lisle, K. Firman, C. Dekker
Initiation of Translocation by Type I Restriction-Modification Enzymes is Associated with a Short DNA Extrusion
Nucleic Acids Research
32 (22): 6540-6547 (2004) PDF

P. Jarillo-Herrero, S. Sapmaz, C. Dekker, L.P. Kouwenhoven, H.S.J. van der Zant
A Few Electron-Hole Semiconducting Carbon Nanotube Quantum Dot
Proceedings of the International Winterschool on Electronic Properties of Novel Materials (Kirchberg, 2004)

R. den Dulk, K.A. Williams, P. T.M. Veenhuizen, M. de Koning, M. Overhand, C. Dekker
Self-Assembly Experiments with PNA-Derivatized Carbon Nanotubes
AIP Proceedings of the Symposium on DNA-Based Molecular Electronics, May 13-15, 2004, Jena, Germany

B.J. , S.G. Lemay, J. Kong, C. Dekker
Electrical generation and absorption of phonons in carbon nanotubes
Nature
432 (7015): 371-374 (2004) PDF

J. Kong, L.P. Kouwenhoven, C. Dekker
Quantum change for nanotubes
Physics World July issue: 17 (2004) WEB LINK

H. A. Heering, F.G.M. Wiertz, C. Dekker, S. de Vries
Direct immobilization of native yeast iso-1 cytochrome c on bare gold: fast electron relay to redox enzymes and zeptomole protein-film voltammetry
Journal of the American Chemical Society
126 (35): 11103-11112 (2004) PDF

R. Seidel, J. van Noort, C. van der Scheer, J. Bloom, N. Dekker, C. F. Dutta, A. Blundell, T. Robinson, K. Firman, C. Dekker
Real-Time Observation of DNA Translocation by the Type I Restriction-Modification Enzyme EcoR124I
Nature Structural & Molecular Biology
11 (9): 838-843 (2004) PDF

D. Stein, M. Kruithof, C. Dekker
Surface-charge-governed ion transport in nanofluidic channels
Physical Review Letters
93 (3): Art. No. 035901 (2004) PDF

B.J. LeRoy, S.G. Lemay, J. Kong, C. Dekker
Scanning tunneling spectroscopy of suspended single-wall carbon nanotubes
Applied Physics Letters
84 (21): 4280-4282 2004 PDF

S.J.T. van Noort, S. Verbrugge, N. Goosens, C. Dekker, R.T. Dame
Dual Architectural Roles of HU: Formation of Flexible Hinges and Rigid Filaments
Proceedings of the National Academy of Science USA
101(18): 6969-6974 (2004) PDF

2003 back to top

S.J. Tans, R.G. Miedema, L.J. Geerligs, C. Dekker, J. Wu, D. Neher, G. Wegner
Electronic transport in monolayers of phthalocyanine polymers
Nanotechnology
14 (9): 1043-1050 (2003) PDF

A. Filoramo, C. Dekker, U. Sivan, C. Schönenberger, M.E. Michel-Beyerle
Highlights from DNA-based electronic project
Phantoms Newsletter Issue 10/11: 4-6 (2003)

A.J. Storm, J.H. Chen, X.S. Ling, H.W. Zandbergen, C. Dekker
Fabrication of solid-state nanopores with single nanometer precision
Nature Materials
2 (8): 537-540 (2003) PDF

Th. Maltezopoulos, A. Kubetzka, M. Morgenstern, R. Wiesendanger, S.G. Lemay, C. Dekker
Confined states in extended metallic nanotubes
Applied Physics Letters
83 (5): 1011-1013 (2003) PDF

J.-O Lee, G. Lientschnig, F.G.M. Wiertz, M. Struijk, R.A.J. Janssen, R. Egberink, D.N. Reinhoudt, A. Grimsdale, K. Mullen, P. Hadley, C. Dekker
Electrical transport study of phenylene-based p-conjugated molecules in a three-terminal geomtery
Annals New York Acad. Sciences, accepted for publication

S.J.T. van Noort, T. van der Heijden, M. de Jager, C. Wyman, R. Kanaar, C. Dekker
The coiled-coil of the human Rad50 DNA repair protein contains specific segments of increased flexibility
Proceedings of the National Academy of Science USA
100 (13): 7581-7586 (2003) cover article PDF

K. Besteman, J.-O Lee, F.G.M. Wiertz, H.A. Heering, C. Dekker
Enzyme-coated carbon nanotubes as single-molecule biosensors
Nano Letters
3 (6): 727-730 (2003) PDF

C. Dekker
Nanotechnologie, fascinatie voor het kleine
Diesrede, 161ste Dies Natalis, 10 januari 2003, TU Delft

J.-O Lee, G. Lientschnig, F.G.M. Wiertz, M. Struijk, R.A.J. Janssen, R. Egberink, D.N. Reinhoudt, P. Hadley, C. Dekker
Absence of strong gate effects in electrical measurements on phenylene-based conjugated molecules
Nano Letters
3 (2): 113-117 (2003) PDF

2002 back to top

K.A. Williams, P.T.M. Veenhuizen, B.G. de la Torre, R. Eritja, and C. Dekker
Carbon Nanotubes with DNA recognition
Nature
420 (6917): 761 (2002) PDF

K.A. Williams, P.T.M. Veenhuizen, B.G. de la Torre, R. Eritja, C. Dekker
Towards DNA-Mediated Self Assembly of Carbon Nanotube Molecular Devices
AIP Conference Proceedings
633: 444-448 (2002)

A. Bachtold, P. Hadley, T. Nakanishi, C. Dekker
Logic circuits with carbon nanotubes
AIP Conference Proceedings
633: 502-507 (2002)

T. Nakanishi, A. Bachtold, C. Dekker
Transport through the interface between a semiconducting carbon nanotube and a metal electrode
Physical Review B
66 (7): Art. No. 073307 (2002) PDF

G. Cuniberti, L. Craco, D. Porath, C. Dekker
Backbone-induced semiconducting behavior in short DNA wires
Physical Review B
65 (24): Art. No. 241314 (2002) PDF

J.W. Janssen, S.G. Lemay, L.P. Kouwenhoven, C. Dekker
Scanning tunneling spectroscopy on crossed carbon nanotubes.
Physical Review B
65 (11): Art. No. 115423 (2002) PDF

A.W. Dunn, E. D. Svensson, C. Dekker
Scanning tunneling spectroscopy of C60 adsorbed on Si(100)-(2×1).
Surface Science
498 (3): 237-243 (2002) PDF

M. Thorwart, M. Grifoni, H.W.Ch. Postma, C. Dekker
Correlated tunneling in intramolecular carbon nanotube quantum dots.
Physical Review Letters
89 (19): 196402 (2002) PDF

2001 back to top

H.W. Ch. Postma, T.F. Teepen, Z. Yao, C. Dekker;
1/f noise in carbon nanotubes.
Electronic correlations: from meso- to nano-physics
Proceedings of the XXXVIth Rencontres de Moriond, Th. Martin and G. Montambaux, Les Ulis (eds), EDP Sciences (France), January 20-27: 433-436, 2001

S.G. Lemay, J.W. Janssen, M. van den Hout, M. Mooij, M.J. Bronikowski, P.A. Willis, R.E. Smalley, L.P. Kouwenhoven, C. Dekker
Two-dimensional imaging of electronic wavefunctions in carbon nanotubes.
Nature, 412 (6847): 617-620 (2001) cover article PDF

A. Bachtold, P. Hadley, C. Dekker
Logic circuits with carbon nanotube transistors Science 294, 1317 (2001)

C. Dekker, M. A. Ratner
Electronic properties of DNA.
Physics World
14 (8): 29-33 (2001) PDF

M. de Jager, S.J.T. van Noort, D.C. van Gent, C. Dekker, R. Kanaar, C. Wyman
Human Rad50/Mre11 is a flexible complex that can tether DNA ends.
Molecular Cell
8 (5): 1129-1135 (2001) cover article PDF

C. Dekker
Single-molecule electronics from carbon nanotubes to DNA.
Nova Acta Leopoldina Supplementum
17: 27 (2001).

M. van den Hout, J.W. Janssen
Elektrongolven in koolstof nanobuisjes.
Nederlandse Tijdschriften voor Natuurkunde
67 (10): 294-297 (2001)

A.J. Storm, S.J.T. van Noort, S. de Vries, C. Dekker
Insulating behavior for DNA molecules between nanoelectrodes.
Applied Physics Letters
79 (23): 3881-3883 (2001) PDF

J.W. Janssen, S. G. Lemay, M. van den Hout, M. Mooij, L. P. Kouwenhoven, C. Dekker
Scanning tunneling spectroscopy on a carbon nanotube buckle.
Proceedings of the American Institute of Physics Conference, H. Kuzmany, S. Roth, M. Mehring, J. Fink (eds.)
Kirchberg, Oostenrijk, March 3-10 591: 293-297 (2001)

H.W.Ch. Postma, T.F. Teepen, Z. Yao, M. Grifoni, C. Dekker
Carbon nanotubes single-electron transistors at room temperature.
Science
293 (5527): 76-79 (2001) PDF

P. Hadley, C.P. Heij, G. Lientschnig, T.F. Teepen, H.W.Ch. Postma, C. Dekker
Single-electron effects in metals and nanotubes for nanoscale circuits.
Proceedings of the MIOP – The German Wireless Week, 11th Conference on Microwaves, Radio Communication and Electromagnetic Compatibility, Stuttgart, Germany, May 8-10, 2001, p. 408-412. ISBN: 3-924651-91-4.

Z. Yao, C. Dekker, Ph. Avouris
Electrical transport through single-wall carbon nanotubes.
M.S. Dresselhaus, G. Dresselhaus, Ph. Avouris (eds.), Carbon Nanotubes; Topics in Applied Physics,
vol. 80, Springer Verlag, Berlin, 2001, p. 147-171. ISSN: 0303-4216.

2000 back to top

H.W.Ch. Postma, M. de Jonge, Z. Yao, C. Dekker;
Electrical transport through carbon nanotube junctions created by mechanical manipulation.
Physical Review B,
62 (16): R10653-R10656 (2000) PDF

D. Porath, A. Bezryadin, S. de Vries, C. Dekker
Direct Measurements of Electrical Transport Through DNA Molecules
Proceedings International Winterschool on Electronic Properties of Novel
Materials
, Ed. H. Kuzmany et al., AIP Conference Proceedings 544, 452 (2000) PDF

L.C. Venema and C. Dekker
Carbon nanotubes
In New Frontiers of Science and Technology , edited by L. Esaki (Frontiers Science Series No. 31, Universal Acad. Press, 293-300 (2000)

L.C. Venema, J.W. Janssen, M.R. Buitelaar, J.W.G. Wildoer, S. Lemay, L.P. Kouwenhoven, C. Dekker
Spatially resolved scanning tunneling spectroscopy on single-walled carbon nanotubes
Physical Review B,
62 (8): 5238-5244 (2000) PDF

S.P. Rubio, Apell, L.C. Venema, C. Dekker
A mechanism for cutting carbon nanotubes with a scanning tunneling microscope
The European Physical Journal B,
17 (2): 301-308 (2000) PDF

S.J. Tans and C. Dekker
Molecular Transistors – Potential modulations along carbon nanotubes
Nature,
404 (6780): 834-835 (2000) PDF

H.W.Ch. Postma, A. Sellmeijer, C. Dekker
Manipulation and imaging of individual single-wall carbon nanotubes with an atomic force microscope
Advanced Materials,
12 (17): 1299-1302 (2000) PDF

Ph. Lambin, A.A. Lucas, S. Amelinckx, C. Dekker
Determination of the helicity of the nanotubes
In Nanotubular structures, characterization and simulation at the atomic scale , edited by A. Loiseau, A. Rubio, and F. Willaime

Z. Yao, C.L. Kane, C. Dekker
High-field electrical transport in single-wall carbon nanotubes
Physical Review Letters,
84 (13): 2941-2944 (2000) PDF

S. Rogge, A. W. Dunn, T. Melin, C. Dekker, L.J. Geerligs
Electrical transport through ultrathin ordered K3C60 films on Si
Carbon,
38 (11-12): 1647-1651 (2000) PDF

H.W.Ch. Postma, Z. Yao, C. Dekker
Electron addition and excitation spectra of individual single-wall carbon nanotubes
Journal of Low Temperature Physics,
118 (5-6): 495-507 (2000) PDF

L.C. Venema, V. Meunier, Ph. Lambin, C. Dekker
Atomic structure of carbon nanotubes from scanning tunneling microscopy
Physical Review B,
61 (4): 2991-2996 (2000) PDF

D. Porath, A. Bezryadin, S. de Vries, C. Dekker
Direct measurements of electrical transport through DNA molecules
Nature,
403 (6770): 635-638 (2000) PDF

O.C. Mantel, F. Chalin, C. Dekker, H.S.J. van der Zant, Y.I. Latyshev, B. Pannetier, P. Monceau
Charge-density-wave current conversion in submicron NbSe3 wires
Physical Review Letters,
84 (3): 538-541 (2000) PDF

1999 back to top

Z. Yao, H.W.Ch. Postma, L. Balents, C. Dekker
Carbon nanotube intramolecular junctions
Nature,
402 (6759): 273-276 (1999) PDF

O.C. Mantel, C.A.W. Bal, C. Langezaal, C. Dekker, H.S.J. van der Zant
Sliding charge-density-wave transport in micron-sized wires of Rb0.30Mo03
Physical Review B,
60 (8): 5287-5294 (1999) PDF

O.C. Mantel, F. Chalin, C. Dekker, H.S.J. van der Zant, Y.I. Latyshev, B. Pannetier, P. Monceau
Submicron structures of the charge-density-wave conductor NbSe3
Synthetic Metals,
103 (1-3): 2612-2615 (1999) PDF

O.C. Mantel, C.A.W. Bal, C. Langezaal, C. Dekker, H.S.J. van der Zant
Lithographic patterned wires of the charge-density-wave conductor Rb0.30Mo03
Journal of Applied Physics,
86 (8): 4440-4445 (1999) PDF

C. Dekker
Carbon nanotubes as molecular quantum wires
Physics Today,
52 (5): 22-28 (1999)

L.C. Venema, J.W.G. Wildoer, S.J. Tans, J.W. Janssen, H. Temminck Tuinstra, L. P. Kouwenhoven, C. Dekker
Imaging electron wave functions of quantized energy levels in carbon nanotubes
Science,
283 (5398): 52-55 (1999) PDF

1998 back to top

S.J. Tans, M.H. Devoret, R.J.A. Groeneveld, C. Dekker
Electron-electron correlations in carbon nanotubes
Nature,
394 (6695): 761-764 (1998) PDF

S. J. Tans, A. R. M. Verschueren, C. Dekker
Room-temperature transistor based on a single carbon nanotube
Nature,
393 (6680): 49-52 (1998) PDF

Bezryadin, A. R. M. Verschueren, S. J. Tans, C. Dekker
Multiprobe transport experiments on individual single-wall carbon nanotubes
Physics Review Letters,
80 (18): 4036-4039 (1998) PDF

J. W. G.Wildoer, L. C. Venema, A. G. Rinzler, R. E. Smalley, C. Dekker
Electronic structure of atomically resolved carbon nanotubes
Nature,
391 (6662): 59-62 (1998) PDF

L.C. Venema, J.W.G. Wildoer, C. Dekker, A.G. Rinzler, R.E. Smalley
STM atomic resolution images of single-wall carbon nanotubes
Applied Physics A,
66: S153-S155 (1998) PDF

C.L. Kane, E.J. Mele, R.S. Lee, J.E. Fisher, P. Petit, H. Dai, A. Thess, R.E. Smalley, A.R.M. Verschueren, S.J. Tans, C. Dekker
Temperature dependent resistivity of single-wall carbon nanotubes
Europhysics Letters,
41 (6): 683-688 (1998) PDF

C. Dekker, S.J. Tans, M.H. Devoret, L.J. Geerligs, R.J.A. Groenveld, L. C. Venema, J.W.G. Wildoer, A.R.M. Verschuren, A. Bezryadin, A. Thess, H. Dai, R. A. Smalley
Electronic properties of individual single-wall nanotubes: Transport and STM results
in Molecular Nanostructures (World Scientific), Eds. H. Kuzmany, J. Fink, M. Mehring, and S. Roth, 467-471 (1998)

1997 back to top

L.C. Venema, J.W.G. Wildoer, H.L.J. Temminck Tuinstra, C. Dekker, A.G. Rinzler, and R.E. Smalley
Length control of individual carbon nanotubes by nanostructuring with the scanning tunneling microscope
Applied Physics Letters,
71 (18): 2629-2631 (1997) PDF

Bezryadin, C. Dekker, G. Schmid
Electrostatic trapping of single conducting nanoparticles between nanoelectrodes
Applied Physics Letters,
71 (9): 1273-1275 (1997) PDF

Bezryadin and C. Dekker
Nanofabrication of electrodes with sub-5 nm spacing for transport experiments on single molecules and metal clusters
Journal of Vacuum Science and Technology B,
15 (4), 793-799 (1997) PDF

S.J. Tans, L.J. Geerligs, C. Dekker, J. Wu, G. Wegner
Deposition and atomic force microscopy of individual phthalocyanine polymers between nanofabricated electrodes
Journal of Vacuum Science and Technology B,
15 (3): 586-589 (1997) PDF

S.J. Tans, L.J. Geerligs, C. Dekker, J. Wu, G. Wegner
Electrical transport in monolayers of phthalocyanine molecular wires and AFM imaging of a single wire bridging two electrodes
Synthetic Metals,
84 (1-3): 733-734 (1997) PDF

O.C. Mantel, H.S.J. van der Zant, A.J. Steinfort, C. Dekker, C. Traeholt, H.W. Zandbergen
Thin films of the charge-density-wave oxide Rb0.30Mo03 by pulsed-laser depostition
Physical Review B,
55 (7): 4817-4824 (1997) PDF

O.C. Mantel, H.S.J. van der Zant, A.J. Steinfort, C. Traeholt, C. Dekker
Orientation of the charge-density-wave chains in thin films of Rb0.30Mo03
Synthetic Metals,
86 (1-3): 2193-2194 (1997) PDF

C. Dekker, S. J. Tans, B. Oberndorff, R. Meyer, L. Venema
STM imaging and spectroscopy of single copperphthalocyanine molecules
Synthetic Metals,
84 (1-3): 853-854 (1997) PDF

C. Dekker, S. J. Tans, L. J. Geerligs, A. Bezryadin, J. Wu, G. Wegner
Towards transport on single molecules: first results on nanofabrication and phthalocyanine polymers
Atomic and Molecular Wires, eds. C. Joachim and S. Roth Kluwer Acad. Publ., 129-138 (1997)

S.J. Tans, M.H. Devoret, H. Dai, A. Thess, R.E. Smalley, L.J. Geerligs, C. Dekker
Individual single-wall nanotubes as quantum wires
Nature, 386 (6624): 474-477 (1997) PDF

J. Liu, H. Dai, J. H. Hafner, D.T. Colbert, R.E. Smalley, S.J. Tans, C. Dekker
Fullerene crop circles
Nature, 385 (6619): 780-781 (1997) PDF

1996 and earlier back to top