Publications


2024

I.F. Davidson, R. Barth, S. Horn, R. Janissen, B. Bauer, C. Dekker, J.-M. Peters

Cohesin supercoils DNA during loop extrusion

Cell, submitted

R. Janissen, R. Barth, I.F. Davidson, M. Taschner, S. Gruber, J.-M. Peters, C. Dekker

All eukaryotic SMC proteins induce a twist of -0.6 at each DNA-loop-extrusion step

Cell, submitted

2023

R. Janissen, R. Barth, M. Polinder, J. van der Torre, C. Dekker

Single-molecule visualization of twin-supercoiled domains generated during transcription

Nucleic Acids Research, gkad1181, https://doi.org/10.1093/nar/gkad1181 Published: 12 December 2023

View PDF

R. Barth, I.F. Davidson, J. van der Torre, M. Taschner, S. Gruber, J.-M. Peters, C. Dekker

SMC motor proteins extrude DNA asymmetrically and contain a directional switch

Cell, under review

View PDF

M. Tišma, R. Janissen, H. Antar, A. Martin-Gonzalez, R. Barth, T. Beekman, J. van der Torre, D. Michieletto, S. Gruber, C. Dekker

Dynamic ParB–DNA interactions initiate and maintain a partition condensate for bacterial chromosome segregation

Nucleic Acids Research 51, 11856–11875 (2023)

View PDF

C. Wen, S. Schmid, C. Dekker

Understanding Electrophoresis and Electroosmosis in Nanopore Sensing with the help of the NEOtrap

Phys Rev. X, under review

M. Tišma, J. Kaljević, S. Gruber, T. Le, C. Dekker

Connecting the dots: key insights on ParB for chromosome segregation from single-molecule studies

FEMS Microbiol. Rev. 48, fuad067, https://doi.org/10.1093/femsre/fuad067 (Jan. 2024)

View PDF

I.E. Roslon, A. Japaridze, L. Naarden, L. Smeets, C. Dekker, A. van Belkum, P.G. Steeneken, F. Alijani

Prospects and Challenges for Graphene Drums As Sensors Of Individual Bacteria

Appl. Phys. Lett. 124, 010501 (2024)

View PDF

B. T. Analikwu, A. Deshayes, J. van der Torre, T. Guérin, A.J. Katan, C. Béneut, R. Barth, J. Phipps, V. Scolari, X. Veaute, C. Barrington, D. Busso, F. Uhlmann, K. Dubrana, S. Mattarocci, C, Dekker, S. Marcand

Telomeres stall DNA loop extrusion by condensin

Cell, under review

View PDF

C. Dekker, C.H. Haering, J.-M. Peters, B.D. Rowland

How do molecular motors fold the genome?

Science 382, 646-648 (2023)

View PDF

P.J. Kolbeck, M. Tišma, B.T. Analikwu, W. Vanderlinden, C. Dekker, J. Lipfert

Supercoiling-dependent DNA binding: quantitative modeling and applications to bulk and single-molecule experiments

Nucl. Acid Res. 52, 59–72 (2024)

View PDF

S. Yang, N. Klughammer, A. Barth, M.E. Tanenbaum, C. Dekker

Zero-mode waveguide nanowells for single-molecule detection in living cells

ACS Nano, 17, 20179–20193

View PDF

I.E. Roslon, A.Japaridze, S.Rodenhuis, L. Hamoen, M.K. Ghatkesar, P.G. Steeneken, C. Dekker, F. Alijani

Microwell-enhanced optical detection of single bacteria

iScience 26, 108268 (2023)

View PDF

N. Klughammer, A. Barth, M. Dekker, A. Fragasso, P.R. Onck, C. Dekker

Diameter Dependence of Transport through Nuclear Pore Complex Mimics Studied Using Optical Nanopores

eLife 12:RP87174 (2023)

View PDF

M. Tišma, F.P. Bock, J. Kerssemakers, A. Japaridze, S. Gruber, C. Dekker

Direct observation of a crescent-shape chromosome in Bacillus subtilis

Nature Comm., under review

View PDF

I.C. Nova, J. Ritmejeris, H. Brinkerhoff, T.J.R. Koenig, J.H. Gundlach, C. Dekker

Detection of phosphorylation post-translational modifications along single peptides with nanopores

Nature Biotechn., DOI https://doi.org/10.1038/s41587-023-01839-z (2023)

View PDF

C. Wen, E. Bertosin, X. Shi, C. Dekker, S. Schmid

Orientation-locked DNA origami for stable trapping of small proteins in the NEOtrap

Nano Lett. 23, 788–794 (2023)

View PDF

I.F. Davidson, R. Barth, M. Zaczek, J. van der Torre, W. Tang, K. Nagasaka, R. Janissen, J. Kerssemakers, G. Wutz, C. Dekker, J.-M. Peters

CTCF is a DNA-tension-dependent barrier to cohesin-mediated DNA loop extrusion

Nature 616, 822–827 (2023)

View PDF

B. Pradhan, R. Barth, E. Kim, I.F. Davidson, J. van der Torre, J.-M. Peters, C. Dekker

Testing pseudotopological and nontopological models for SMC-driven DNA loop extrusion against roadblock-traversal experiments

Scientific Rep. 13, 8100 (2023)

View PDF

E. Kim, R. Barth, C. Dekker

Looping the genome with SMC complexes

Ann. Rev. Biochem. 92, 15-41 (2023)

View PDF

X. Shi, A.-K. Pumm, C. Maffeo, F. Kohler, e. Feigl, W. Zhao, D. Verschueren, R. Golestanian, A. Aksimentiev, H. Dietz, C. Dekker

A DNA turbine powered by a transmembrane potential across a nanopore

Nature Nanotechnology, https://doi.org/10.1038/s41565-023-01527-8 (2023)

View PDF

2022

N. De Franceschi. R. Barth, S. Meindlhumer, A. Fragasso, C. Dekker

Dynamin A as a one-component division machinery for synthetic cells

Nature Nanotechnology 19, 70–76 (2024)

View PDF

N. De Franceschi, B. Hoogenberg, C. Dekker

Engineering ssRNA tile filaments for (dis)assembly and membrane binding

Nanoscale, DOI 10.1039/D3NR06423A, Advance Article Febr.7 2024

View PDF

P. He, A. Katan, L. Tubiana, C. Dekker, D. Michieletto

Single-Molecule Structure and Topology of Kinetoplast DNA Networks

Phys. Rev. X 13, 021010 (2023)

View PDF

A. Japaridze, R. van Wee, C. Gogou, J.W.J. Kerssemakers, C. Dekker

MukBEF-dependent chromosomal organization in widened E. coli bacteria

Frontier Microbiol. 14: 1107093 (2023)

View PDF

M. Holub, A. Birnie, A. Japaridze, J. van der Torre, M. den Ridder, C. de Ram, M. Pabst, C. Dekker

Extracting and characterizing protein-free megabasepair DNA for in vitro experiments

Cell Rep. Meth. 2, 100366 (2022)

View PDF

S. Meindlhumer, J. Kerssemakers, C. Dekker

Quantitative analysis of surface wave patterns of Min proteins

Frontiers in Physics 20, doi.org/10.3389/fphy.2022.930811 (2022)

View PDF

A. Blanch Jover, C. Dekker

The archaeal Cdv cell division system

Trends in Microbiol. 31, 601-615 (2023)

View PDF

R. Patton McCord, M. Taipale, S. Teichmann, R. Vorhees, Y. Wan C. Dekker, N.E.Sanjana

Voices on technology: The molecular biologists’ ever-expanding toy box

Molec. Cell 82, 221 (2022)

View PDF

N. De Franceschi, W. Pezeshkian, A. Fragasso, B.M.H. Bruininks, S. Tsai, S.J. Marrink, C. Dekker

A synthetic membrane shaper for controlled liposome deformation

ACS Nano 17, 966–978 (2023)

View PDF

S. Meindlhumer, F. Brauns, J. Finžgar, J. Kerssemakers, C. Dekker, E. Frey

Directing Min protein patterns with advective bulk flow

Nature Comm. 14, 450 (2023)

View PDF

A. Fragasso, H.W. de Vries, J. Andersson, E.O. van der Sluis, E. van der Giessen, P.R. Onck, C. Dekker

Transport receptor occupancy in Nuclear Pore Complex mimics

Nano Research 15, 9689–9703 (2022)

View PDF

W. Yang, C. Dekker

Single-molecule ionic and optical sensing with nanoapertures

Book chapter in ' Single Molecule Nanosensors and Nanosystems' (Eds. W. Bowen, R. Gordon, F. Vollmer; Springer book series Nanostructure Science and Technology), pages 367-387

View PDF

2021

Y.-L. Ying, Z.-L. Hu, S. Zhang, Y. Qing, A. Fragasso, G. Maglia, A. Meller, H. Bayley, C. Dekker, Y.-T. Long

Nanopore-based technologies beyond DNA sequencing

Nature Nanotechnology 17, 1136–1146 (2022)

View PDF

L. Würthner, F. Brauns, G. Pawlik, J. Halatek, J. Kerssemakers, C. Dekker, E. Frey

Bridging scales in a multiscale pattern-forming system

PNAS 119, e2206888119 (2022)

View PDF

M. Tišma, M. Panoukidou, H. Antar, Y.-M. Soh, R. Barth, B. Pradhan, A. Barth, J. van der Torre, D. Michieletto, S. Gruber, C. Dekker

ParB proteins can bypass DNA-bound roadblocks via dimer-dimer recruitment

Science Advances 8, eabn3299 (2022)

View PDF

A. Blanch Jover, N. De Franceschi, D. Fenel, W. Weissenhorn, C. Dekker

The archaeal division protein CdvB1 assembles into polymers that are depolymerized by CdvC

FEBS Lett. 596, 958 (2022)

View PDF

M. Bengtson, M. Bharadwaj, O. Franch, J. van der Torre, V. Meerdink, H. Schallig, C. Dekker

CRISPR-dCas9 based DNA detection scheme for diagnostics in resource limited settings

Nanoscale 14, 1885 (2022)

View PDF

I.E. Rosłoń, A. Japaridze, P.G. Steeneken, C. Dekker, F. Alijani

Probing nanomotion of single bacteria with graphene drums

Nature Nanotechnology 17, 637–642 (2022)

View PDF

X. Shi, A.-K. Pumm, J. Isensee, W. Zhao, D. Verschueren, A. Martin-Gonzalez, R. Golestanian, H. Dietz, C. Dekker

Sustained unidirectional rotation of a self-organized DNA rotor on a nanopore

Nature Physics 18, 1105–1111 (2022)

View PDF

B. Pradhan, R. Barth, E. Kim, I.F. Davidson, B. Bauer, T. van Laar, W. Yang, J.-K. Ryu, J. van der Torre, J.-M. Peters, C. Dekker

SMC complexes can pass physical roadblocks bigger than their ring size, indicating a nontopological mechanism for DNA loop extrusion

Cell Reports DOI:https://doi.org/10.1016/j.celrep.2022.111491

View PDF

H. Brinkerhoff, A.S.W. Kang, J. Liu, A. Aksimentiev, C. Dekker

Multiple rereads of single proteins at single–amino acid resolution using nanopores

Science 374, 1509-1513 (2021)

View PDF

F. Chardon, A. Japaridze, H. Witt, L. Velikovsky, C. Chakraborty, T. Wihelm, M. Dumont, W. Yang, C. Kikuti, S. Gangnard, G. Wuite, C. Dekker, D. Fachinetti

CENP-B-mediated DNA loops regulate activity and stability of human centromeres

Molec. Cell 82, 1751–1767 (2022)

View PDF

K.D. Whitley, S. Middlemiss, C. Jukes, C. Dekker, S. Holden

High-resolution imaging of bacterial spatial organization with Vertical Cell Imaging by Nanostructured Immobilisation

Nature Protocols 17, 847–869 (2022)

View PDF

S. Schmid, C. Dekker

The NEOtrap – en route with a new single-molecule technique

iScience 24, 103007 (2021)

View PDF

W. Yang, M. van Dijk, C. Primavera, C. Dekker

FIB-milled plasmonic nanoapertures allow for long trapping times of individual proteins

iScience, in print

View PDF

E. Kim, A. Martin Gonzalez, B. Pradhan, J. van der Torre, C. Dekker

Condensin-driven loop extrusion on supercoiled DNA

Nature Struct. Molec. Biol. in print for July 14

View PDF

C.N. Hulleman, R.Ø. Thorsen, E. Kim, C. Dekker, S. Stallinga, B. Rieger

Simultaneous orientation and 3D localization microscopy with a Vortex point spread function

Nature Comm. 12, 5934 (2021)

View PDF

C. Gogou, A. Japaridze, C. Dekker

Mechanisms for Chromosome Segregation in Bacteria

Frontiers Microbiol. 12, 685687 (2021)

View PDF

S. Schmid, P. Stömmer, H. Dietz, C. Dekker

Nanopore electro-osmotic trap for the label-free study of single proteins and their conformations

Nature Nanotechn. (2021) https://doi.org/10.1038/s41565-021-00958-5

View PDF

A. Fragasso, N. De Franceschi, P. Stömmer, E.O. van der Sluis, H. Dietz, C. Dekker

Reconstitution of ultrawide DNA origami pores in liposomes for transmembrane transport of macromolecules

ACS Nano online June 25, 2021, doi.org/10.1021/acsnano.1c01669

View PDF

L. Van de Cauter, F. Fanalista, L. van Buren, N. De Franceschi, E. Godino, S. Bouw, C. Danelon, C. Dekker, G.H. Koenderink, K.A. Ganzinger

Optimized cDICE for efficient reconstitution of biological systems in giant unilamellar vesicles

ACS Synth. Biol. 10, 1690–1702 (2021)

View PDF

J.-K. Ryu, S.-H. Rah, R. Janissen, J.W.J. Kerssemakers, C. Dekker

Resolving the step size in condensin-driven DNA loop extrusion identifies ATP binding as the step-generating process

Nucl. Acid Res., in print

View PDF

W. Yang, B. Radha, A. Choudhary, G. Mettela, Y. You, A. Geim, A. Aksimentiev, A. Keerthi, C. Dekker

Translocation of DNA through ultrathin nanoslits

Advanced Mater. 2007682 (2021)

View PDF

A. Japaridze, W. Yang, C. Dekker, W. Nasser, G. Muskhelishvili

DNA sequence-directed cooperation between nucleoid-associated proteins

iScience 24, 102408 (2021)

View PDF

J.‐K. Ryu, C. Bouchoux, H.W. Liu, E. Kim, M. Minamino, R. de Groot, A.J. Katan, A. Bonato, D. Marenduzzo, D. Michieletto, F. Uhlmann, C. Dekker

Bridging-induced phase separation induced by cohesin SMC protein complexes

Science Advances 7, eabe5905 (2021)

View PDF

F. Brauns, G. Pawlik, J. Halatek, J. Kerssemakers, E. Frey, C. Dekker

Bulk-surface coupling identifies the mechanistic connection between Min-protein patterns in vivo and in vitro

Nature Comm. 12, 3312 (2021)

View PDF

2020

L. Olivi, M. Berger, R.N.P. Creyghton, N. De Franceschi, C. Dekker, B.M. Mulder, N.J. Claassens, P.R. ten Wolde, J. van der Oost

Towards a synthetic cell cycle

Nature Comm.12, 4531 (2021)

View PDF

N. Klughammer, C. Dekker

Palladium zero-mode waveguides for optical single molecule detection with nanopores

Nanotechnology 32, 18LT01 (2021); see also corrigendum Nanotechnology 32, 449501 (2021)

View PDF

S. Schmid, C. Dekker

Nanopores – a Versatile Tool to Study Protein Dynamics

Essays in Biochemistry EBC20200020 (2020)

View PDF

S. Deshpande, C. Dekker

Studying Phase Separation in Confinement

Curr. Opin. Colloid Interface Sci. 52, 101419 (2021)

View PDF

A. Birnie, C. Dekker

Genome-in-a-box: building a chromosome from the bottom up

ACS Nano 15, 1, 111–124 (2021)

View PDF

M. Bharadwaj, M. Bengtson, M. Golverdingen, L. Waling, C. Dekker

Diagnosing point-of-care diagnostics for neglected tropical diseases

Plos NTDs, under review

View PDF

K.D. Whitley, C. Jukes, N. Tregidgo, E. Karinou, P. Almada, R. Henriques, C. Dekker, S. Holden

FtsZ treadmilling is essential for Z-ring condensation and septal constriction initiation in bacterial cell division

Nature Comm. 12, 2448 (2021)

View PDF

J. Alfaro, P. Bohländer, M. Dai, M. Filius, C.J. Howard, X. van Kooten, S. Ohayon, A. Pomorski, S. Schmid, S.H. Kim, P. Samaras, B. Kuster, G. Bedran, M. Wilhelm, L. Sepiashvili, U. Kalathiya1, S. Kumar, A. Aksimentiev, D. Stein, N. Drachman, D. Goodlett, C. Masselon, S. Hentz, M. Chinappi, C. Chan, M. Mayer, S. Lindsey, D. Rodriguez Larrea, E.M. Marcotte, G. Maglia, G. Dittmar, J. Marino, Z. Kelman, M. Wanunu, N.L. Kelleher, R. Eelkema, P. Yin, E.V. Anslyn, C. Dekker, A. Meller, C. Joo

The emerging landscape of single-molecule protein sequencing technologies

Nature Meth. 18, 604–617 (2021)

View PDF

M.Bengtson, M. Bharadwaj, A. ten Bosch, H. Nyakundi, D. Matoke-Muhia, C. Dekker, J.C. Diehl

Matching Development of Point-of-Care Diagnostic Tests to the Local Context: A Case Study of Visceral Leishmaniasis in Kenya and Uganda

Global Health: Science and Practice 8, 549-565 (2020)

View PDF

M.G.F. Last, S. Deshpande, C.Dekker

pH-controlled coacervate-membrane interactions within liposomes

ACS Nano 14, 4487–4498 (2020)

View PDF

A. Fragasso, S. Schmid, C. Dekker

Comparing current noise in biological and solid-state nanopores

ACS Nano 14, 1338-1349 (2020)

View PDF

S. Caneva, M.D. Hermans, M. Lee, A. Garcia-Fuente, K. Watanabe, T. Taniguchi, C. Dekker, J. Ferrer, H.S.J. van der Zant, P. Gehring

A Mechanically Tunable Quantum Dot in a Graphene Break Junction

Nano Lett. 20, 4924–4931 (2020)

View PDF

A. Japaridze, C. Gogou, J. W. J. Kerssemakers, H. M. Nguyen, C. Dekker

Direct observation of independently moving replisomes in Escherichia coli

Nature Comm. 11, 3109 (2020)

View PDF

K.B. Smith, M. Wehrli, A. Japaridze, S. Assenza, C. Dekker, R. Mezzenga

Interplay between confinement and drag forces determine the fate of amyloid fibrils

Phys. Rev. Lett. 124, 118102 (2020)

View PDF

E. Kim, J. Kerssemakers, I.A. Shaltiel, C.H. Haering, C. Dekker

DNA-loop extruding condensin complexes can traverse one another

Nature 579, 438–442 (2020)

View PDF

2019

J.-K Ryu, A.J. Katan, E.O. van der Sluis, T. Wisse, R. de Groot, C. Haering, C. Dekker

The condensin holocomplex cycles dynamically between open and collapsed states

Nature Struct. Molec. Biol. 27, 1134–1141 (2020)

View PDF

A. Fragasso, H.W. de Vries, E.O. van der Sluis, E. van der Giessen, P.R. Onck, C. Dekker

A designer FG-Nup that reconstitutes the selective transport barrier of the Nuclear Pore Complex

Nature Comm. 12, 2010 (2021)

View PDF

L. Restrepo-Pérez, C. Heung Wong, G. Maglia, C. Dekker, C. Joo

Label-free detection of post-translational modifications with a nanopore

Nano Lett. 19, 7957-7964 (2019)

View PDF

L. Restrepo-Pérez, G. Huang , P.R. Bohländer, N. Worp, R. Eelkema, G. Maglia, C. Joo, C. Dekker

Resolving Chemical Modifications to a Single Amino Acid within a Peptide Using a Biological Nanopore

ACS Nano 13, 13668-13676 (2019)

View PDF

S. Deshpande, C. Dekker

Synthetic life on a chip

Emerging Topics in the Life Sciences 3, 559–566 (2019)

View PDF

S. Deshpande, S. Wunnava, D. Hueting, C. Dekker

Membrane tension-mediated growth of liposomes

Small 1902898 (2019)

View PDF

F. Fanalista, A. Birnie, R. Maan, F. Burla, K. Charles, G. Pawlik, S. Deshpande, G.H. Koenderink, M. Dogterom, C. Dekker

Shape and size control of artificial cells for bottom-up biology

ACS Nano 13, 5439-5450 (2019)

View PDF

F. Wu, A. Japaridze, X. Zheng, J.W.J. Kerssemakers, C. Dekker

Direct imaging of the circular chromosome in a live bacterium

Nature Commun. 10, 2194 (2019)

View PDF

Y. Kabiri, A. Angelin, I. Ahmed, H. Mutlu, J. Bauer, C.M. Niemeyer, H. Zandbergen, C. Dekker

Intercalating electron dyes for TEM visualization of DNA at the single-molecule level

Chembiochem 20, 822-830 (2019)

View PDF

A.J. Perez, Y. Cesbron, S.L. Shaw, J.B. Villicana, H.-C.T. Tsui, M.J. Boersma, Z.A. Ye, Y. Tovpeko, C. Dekker, S. Holden, M.E. Winkler

Movement dynamics of divisome proteins and PBP2x:FtsW in cells of Streptococcus pneumoniae

PNAS, 116, 3211-3220 (2019)

View PDF

K. Al Nahas, J. Cama, M. Schaich, K. Hammond, S. Deshpande, C. Dekker, M.G. Ryadnov, U.F. Keyser

A Microfluidic Platform for the Characterisation of Membrane Active Antimicrobials

Lab on a chip 16, 837 (2019)

View PDF

D. Verschueren, X. Shi, C. Dekker

Nano-optical tweezing of single proteins in plasmonic nanopores

Small Methods 1800465 (2019)

View PDF

Y. Kabiri, R.B.G. Ravelli, T. Lehnert, H. Qi, A.J. Katan, N. Roest, U. Kaiser, C. Dekker, P. Peters, H. Zandbergen

Visualization of unstained DNA nanostructures with advanced in-focus transmission electron microscopy techniques

Scientific Rep. 9, 7218 (2019)

View PDF

A. Fragasso, S. Pud, C. Dekker

1/f noise in solid-state nanopores is governed by access and surface regions

Nanotechn. 30, 395202 (2019)

View PDF

S. Zhao, L. Restrepo-Pérez, M. Soskine, G. Maglia, C. Joo, Cees Dekker, A. Aksimentiev

Electro-mechanical conductance modulation of a nanopore using a removable gate

ACS Nano 13, 2398-2409 (2019)

View PDF

A.M.O. Elbatsh, E. Kim, J.M. Eeftens, J.A. Raaijmakers, R.H. van der Weide, S. Bravo,M. Ganji, J. uit de Bos, H. Teunissen, R.H. Medema, E. de Wit, C.H. Haering, C. Dekker,B.D. Rowland

Distinct Roles for Condensin’s Two ATPase Sites in Chromosome Condensation

Molec. Cell 76, 724-737.e5 (2019)

View PDF

M. Schaich, J. Cama, K. Al Nahas, D. Sobota, K. Jahnke, S. Deshpande, C. Dekker, U.F. Keyser

An integrated microfluidic platform for quantifying drug permeation across biomimetic vesicle membranes

Molec. Pharmac. 16, 2494-2501 (2019)

View PDF

S. Deshpande, F. Brandenburg, A. Lau, W.K. Spoelstra, L. Reese, S. Wunnava, M. Dogterom, C. Dekker

Spatiotemporal control of coacervate formation within liposomes

Nature Comm. 10, 1800 (2019)

View PDF

F.J.H. Hol, G.M. Whitesides, C. Dekker

Bacteria in Paper, a versatile platform to study bacterial ecology

Ecology Lett. 22, 1316-1323 (2019)

View PDF

L. Loeff, J. Kerssemakers, C. Joo, C. Dekker

AutoStepfinder: a fast and automated step detection method for single-molecule analysis

Patterns, 2, 100256 (2021)

View PDF

F. Wu, P. Swain, L. Kuijpers, X. Zheng, K. Felter, M. Guurink, J. Solari, S. Jun, T.S. Shimizu, D. Chaudhuri, B. Mulder, C. Dekker

Cell boundary confinement sets the size and position of the E. coli chromosome

Current Biology 29, 2131-2144 (2019)

View PDF

2018

S. Deshpande and C. Dekker

On chip microfluidic production of cell-sized liposomes

Nature Protocols 13 856–874 (2018)

View PDF

A. Ananth, M. Genua, N. Aissaoui, L. Díaz, N.B. Eisele, S. Frey, C. Dekker, R.P. Richter, D. Görlich

Reversible Immobilization of Proteins in Sensors and Solid-state Nanopores

Small 14 1703357(2018)

View PDF

S. Deshpande, K. Spoelstra, M. van Doorn, Jacob Kerssemakers, C. Dekker

Mechanical division of cell-sized liposomes

ACS Nano 12, 2560–2568 (2018)

View PDF

Y. Caspi and C. Dekker

Dividing the archaeal way: the ancient Cdv cell-division machinery

Frontiers in Microbiology 9 174 (2018)

View PDF

S.J. Heerema, L. Vicarelli, S. Pud, R.N. Schouten, H.W. Zandbergen, C. Dekker

Probing DNA translocations with inplane current signals in a graphene nanoribbon with a nanopore

ACS Nano 12 2623–2633 (2018)

View PDF

Lithography-based fabrication of nanopore arrays in freestanding SiN and graphene membranes

D.V. Verschueren, W. Yang, C. Dekker

Nanotechnology 29 145302 (2018)

View PDF

M. Ganji, I.A. Shaltiel, S. Bisht, E. Kim, A. Kalichava, C.H. Haering, C. Dekker

Real-time imaging of DNA loop extrusion by condensin

Science 360 102-105 (2018)

View PDF

P. Cadinu, G. Campolo, S. Pud, J.B. Edel, C. Dekker, A.P. Ivanov

Double barrel nanopores as a new tool for controlling single-molecule transport

Nano Lett. 18 2738–2745 (2018)

View PDF

P. Ketterer, A.N. Ananth, D. Laman Trip, A. Mishra, E. Bertosin, M. Ganji, J. van der Torre, P. Onck, H. Dietz, C. Dekker

DNA origami scaffold for studying intrinsically disordered proteins of the nuclear pore complex

Nature Comm. 9, 902 (2018)

View PDF

S.H. Kim, M. Ganji, J. van der Torre, E. Abbondanzieri, C. Dekker

DNA sequence encodes the position of DNA supercoils

eLife 7:e36557 (2018)

View PDF

A.N. Ananth, A. Mishra, S. Frey, A. Dwarakasing, R. Versloot, E. Van der Giessen, D. Gorlich, P. Onck, C. Dekker

Spatial structure of disordered proteins dictates conductance and selectivity in Nuclear Pore Complex mimics

eLife 7 e31510 (2018)

View PDF

L. Restrepo-Pérez, C. Joo, C. Dekker

Paving the Way to Single-Molecule Protein Sequencing

Nature Nanotechn. 13, 786–796 (2018)

View PDF

S. Caneva, P. Gehring, V.M. García-Suárez, A. García-Fuente, D. Stefani, I.J. Olavarria-Contreras, J. Ferrer, Cees Dekker, H.S.J. van der Zant

Mechanically Controlled Quantum Interference in Graphene Break Junctions

Nature Nanotechn. 13, 1126–1131 (2018)

View PDF

F. Fanalista, S. Deshpande, A. Lau, G. Pawlik, C. Dekker

FtsZ-induced Shape Transformation of Coacervates

Advanced Biosystems 1800136 (2018)

C. Dekker

How we made the carbon nanotube transistor

Nature Electr. 1, 518 (2018)

View PDF

W. Yang, L. Restrepo-Pérez, M. Bengtson, S.J. Heerema, A. Birnie, J. van der Torre, C. Dekker

Detection of CRISPR-dCas9 on DNA with solid-state nanopores

Nano Lett. 18, 6469-6474 (2018)

View PDF

D.V. Verschueren, S. Pud, X. Shi, L. de Angelis, L. Kuipers, C. Dekker

Label-free optical detection of DNA translocations through plasmonic nanopores

ACS Nano 13, 61-70 (2019)

View PDF

X. Shi, D.V. Verschueren, C. Dekker

Active delivery of single DNA molecules into a plasmonic nanopore for label-free optical sensing

Nano Lett. 18 , 8003 - 8010 (2018)

View PDF

2017

T. Terekawa, S. Bisht, J.M. Eeftens, C. Dekker, C.H. Haering, E.C. Greene

The condensin complex is a mechanochemical motor that translocates along DNA

Science 358, 672-676 (2017)

View PDF

M. Neklyudova, A. Erdamar, L. Vicarelli, S.J. Heerema, T. Rehfeldt, G. Pandraud, Z. Kolahdouz, C. Dekker, H.W. Zandbergen

Through-membrane electron-beam lithography for ultrathin membrane applications

Appl. Phys. Lett. 111, 063105 (2017)

View PDF

J.M. Eeftens, S. Bisht, J. Kerssemakers, C.H. Haering, C. Dekker

Real-time detection of condensin-driven DNA compaction reveals a multistep binding mechanism

EMBO J. e201797596 (2017)

View PDF

J.M. Eeftens and C. Dekker

Catching DNA with hoops – biophysical approaches to clarify the mechanism of SMC proteins

Nature Struct. Molec. Biol. 24 1012 (2017)

View PDF

K. Spoelstra, S. Deshpande, C. Dekker

Tailoring the appearance: what will synthetic cells look like?

Current Opinions in Biotechnology 51 47 (2018)

View PDF

X. Shi, D. Verschueren, S. Pud, C. Dekker

Integrating sub-3nm plasmonic gaops into solid-state nanopores

Small 1703307 (2017)

View PDF

S. Deshpande, A. Birnie, C. Dekker

On-chip density-based purification of liposomes

Biomicrofluidics 11 034106 (2017)

View PDF

Y. Kabiri, A.N. Ananth, J. van der Torre, A. Katan, J.-Y. Hong, S. Malladi, J. Kong, H. Zandbergen, C. Dekker

Distortion of DNA origami on graphene imaged with advanced TEM techniques

Small 1700876 (2017)

View PDF

R. Vlijm, S. H. Kim, P. de Zwart, Y. Dalal, C. Dekker

The supercoiling state of DNA determines the handedness of both H3 and CENP-A nucleosomes

Nanoscale 9, 1862 – 1870 (2017)

View PDF

Y. Nechemia-Arbely, D. Fachinetti, K. H. Miga, N. Sekulic, G. Soni, A. Karwei Wong, A. Young Lee, K. Nguyen, C. Dekker, B. Ren, B. E. Black, D. W. Cleveland

Human centromeric CENP-A chromatin is a homotypic, octameric nucleosome at all cell cycle points

J Cell Biol., 216, 607 (2017)

View PDF

D.R. Burnham, B. Nijholt, I. De Vlaminck, J. Quan, T. Yusufzai, C. Dekker

Annealing helicase HARP closes RPA-stabilised DNA bubbles non-processively

Nucl. Acid Res. 45, 4687-4695 (2017)

View PDF

A.W. Bisson-Filho, Y.-P. Hsu, G.R. Squyres, E. Kuru, F. Wu, C. Jukes, C. Dekker, S. Holden, M.S. VanNieuwenhze, Y.V. Brun, E.C. Garner

Treadmilling by FtsZ filaments drives peptidoglycan synthesis and bacterial cell division

Science 355, 739-743 (2017)

View PDF

L. Restrepo-Pérez, S. John, A. Aksimentiev, C. Joo, C. Dekker

SDS-Assisted Protein Transport Through Solid-State Nanopores

Nanoscale 9 11685 (2017)

View PDF

J. Wiktor, M. van der Does, L. Buller, D.J. Sherratt, C. Dekker

Direct observation of end resection by RecBCD during double-stranded DNA break repair in vivo

Nucl. Acid Res., 46, 1821 (2018)

View PDF

2016

Y. Caspi, C. Dekker

Mapping out Min protein patterns in fully confined fluidic chambers

eLife 5:e19271

M. Ganji, S. H. Kim, J. van der Torre, E. Abbondanzieri, C. Dekker

Intercalation-based single-molecule fluorescence assay to study DNA supercoil dynamics

Nano Lett. 16 4699 (2016)

View PDF

S.H. Kim, R. Vlijm, J. van der Torre, Y. Dalal, C. Dekker

CENP-A and H3 nucleosomes display a similar stability to force-mediated disassembly

Plos One 11 e0165078 (2016)

View PDF

S. Pud, S.-H. Chao, M. Belkin, D. Verschueren, T. Huijben, C. van Engelenburg, Cees Dekker, A.. Aksimentiev

Mechanical Trapping of DNA in a Double-Nanopore System

Nano Lett. 16, 8021 (2016)

View PDF

J. Wiktor, C. Lesterlin, D. J. Sherratt, C. Dekker

CRISPR-mediated control of the bacterial initiation of replication

Nucleic Acids Research 44 3801-10 (2016)

View PDF

S.J. Heerema and C. Dekker

Graphene nanodevices for DNA sequencing

Nature Nanotechn. 11 127–136 (2016)

View PDF

S. McGinn et al

New Technologies for DNA analysis

New Biotechnology 33 311 (2016)

View PDF

F.J.H. Hol, O. Rotem, E. Jurkevitch, C. Dekker, D.A. Koster

Predator-prey dynamics in micro-scale patchy landscapes

Proc. Roy. Soc. B 283, 20152154 (2016)

View PDF

C. Plesa, D. Verschueren, J.W. Ruitenberg, M.J. Witteveen, M.P. Jonsson, A.Y. Grosberg, Y. Rabin, C. Dekker

Direct observation of DNA knots using solid state nanopores

Nature Nanotechn. 11, 1093–1097 (2016)

View PDF

S. Deshpande, Y. Caspi, A. Meijering, C. Dekker

Octanol-assisted liposome assembly: A robust method to produce liposomes on chip

Nature Commun. 7 10447 (2016)

View PDF

F. Wu, C. Dekker

Nanofabricated structures and microfluidic devices for bacteria: from techniques to biology

Chem. Soc. Rev. 45 268-280 (2016)

View PDF

J.M. Eeftens, A.J. Katan, M. Kschonsak, M. Hassler, L. de Wilde, E.M. Dief, C. Haering, C. Dekker

Condensin Smc2–Smc4 dimers are flexible and dynamic

Cell Reports 14 1813-8 (2016)

View PDF

F. Wu, J. Halatek, M Reiter, E. Kingma, E. Frey, C. Dekker

Multistability and dynamic transitions of intracellular Min protein patterns

Molecular Systems Biology 12 837 (2016)

View PDF

2015

C. Plesa, C. Dekker

Data analysis methods for solid-state nanopores

Nanotechn. 26 084003 (2015)

View PDF

S.J. Heerema, G.F. Schneider, M. Rozemuller, L. Vicarelli, H. W. Zandbergen and C. Dekker

1/f noise in graphene nanopores

Nanotechn. 26 074001 (2015)

View PDF

M. Muthukumar, C. Plesa, C. Dekker

Single-molecule sensing with nanopores

Physics Today 68, 40 (2015)

View PDF

R. Vlijm, A. Mashaghi, S. Bernard, M. Modesti, C. Dekker

Experimental phase diagram of negatively supercoiled DNA measured by magnetic tweezers and fluorescence,

Nanoscale 7, 3205-3216 (2015)

View PDF

L. Vicarelli, S.J. Heerema, C. Dekker, H.W. Zandbergen

Controlling defects in graphene for optimizing the electrical properties of graphene nanodevices

ACS Nano 4 3428 (2015)

View PDF

F. Wu, E. van Rijn, B.G.C. van Schie, J.E. Keymer, C. Dekker

Multicolor imaging of the bacterial nucleoid and cell division proteins with blue, orange, and near-infrared fluorescent proteins

Frontiers Microbiol. 6 607 (2015)

View PDF

M. Belkin, S.-H. Chao, M. Jonsson, C. Dekker, A. Aksimentiev

Plasmonic nanopores for trapping, controlling displacement, and sequencing of DNA

ACS Nano9 10598–10611 (2015)

View PDF

J. Eeftens, J. van der Torre, D.R. Burnham, C. Dekker

Copper-free click chemistry for attachment of biomolecules in magnetic tweezers

BMC Biophys. 8 9 (2015)

View PDF

R. Vlijm, M. Lee, O. Ordu, A. Boltengagen, A. Lusser, N.H. Dekker, C. Dekker

Comparing the assembly and handedness dynamics of (H3.3-H4)2 tetrasomes to canonical tetrasomes

Plos One 10 e0141267 (2015)

View PDF

C. Plesa, J.W. Ruitenberg, M.J. Witteveen, C. Dekker

Detection of individual proteins bound along DNA using solid state nanopores

Nano Lett. 15 3153–3158 (2015)

View PDF

F. J.H. Hol, P. Galajda, R.G. Woolthuis, C. Dekker, J.E. Keymer

The idiosyncrasy of spatial structure in bacterial competition

BMC research notes, 8, 245 (2015)

A.C. Ferrari et al

Science and technology roadmap for graphene, related two-dimensional crystals, and hybrid systems

Nanoscale 7 4598-4810 (2015)

View PDF

R. Vlijm, M. Lee, J. Lipfert, A. Lusser, C. Dekker, N.H. Dekker

Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes

Cell Reports 10 216 – 225 (2015)

View PDF

Y. Li, F. Nicoli, C. Chen, L. Lagae, G. Groeseneken, T. Stakenborg, C. Dekker, P. Van Dorpe, M.P. Jonsson

Photoresistance Switching of Plasmonic Nanopores

Nano Lett. 15 776–782 (2015)

View PDF

T.R. Blosser, L. Loeff, E.R. Westra, M. Vlot, T. Künne, M. Sobota, C. Buyzerd, C. Dekker, S.J.J. Brouns, C. Joo

Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex

Molec. Cell 58 60–70 (2015)

View PDF

C. Plesa, N. van Loo, P. Ketterer, H. Dietz, C. Dekker

Velocity of DNA during translocation through a solid state nanopore

Nano Lett. 15 732–737 (2015)

View PDF

F.J.H. Hol, B. Hubert, C. Dekker, J.E. Keymer

Density dependent adaptive resistance allows swimming bacteria to colonize an antibiotic gradient

Int. Soc. Microb. Ecol. J. 10, 30 (2015)

View PDF

C. Plesa, N. van Loo,C. Dekker

DNA nanopore translocation in glutamate solutions

Nanoscale 7 13605-13609 (2015)

View PDF

F. Wu, B.G.C. van Schie, J. E. Keymer, C. Dekker

Symmetry and scale orient Min protein patterns in shaped bacterial sculptures

Nature Nanotechn. 10, 719–726 (2015)

View PDF

S. Pud, D. Verschueren, N. Vukovic, C. Plesa, M.P. Jonsson,C. Dekker

Self-aligned plasmonic nanopores by optically controlled dielectric breakdown

Nano Lett. 15, 7112-7 (2015)

View PDF

2014

J.W.J. Kerssemakers, T.R. Blosser, C. Dekker

A simple self-calibrating method to measure the height of fluorescent molecules and beads with nanometer resolution

Nano Lett. 14 4469 (2014)

View PDF

A. Mashaghi and C. Dekker

Systems and synthetic biology approaches to cell division

Systems and Synthetic Biology 8 173–178 (2014)

View PDF

FJH Hol, MJ Voges, C Dekker, JE Keymer

Nutrient-responsive regulation determines biodiversity in a colicin-mediated bacterial community

BMC Biology 12:70 (2014)

View PDF

Y. Caspi and C. Dekker

Divided we stand: splitting synthetic cells for their proliferation

Systems and Synthetic Biology 8 249-269 (2014)

View PDF

A.J. Katan, R. Vlijm, A. Lusser, C. Dekker

Dynamics of nucleosomal structures measured by high-speed Atomic Force Microscopy

Small 8 976–984 (2014)

View PDF

D.R. Burnham, I. De Vlaminck, T. Henighan, C. Dekker

Skewed Brownian fluctuations in single-molecule magnetic tweezers

Plos One 9 e108271 (2014)

View PDF

F.J.H. Hol and C. Dekker

Zooming in to see the bigger picture: using nanofabrication to study bacteria

Science 346 1251821 (2014)

View PDF

F. Nicoli, D. Verschueren, C. Dekker, M. P. Jonsson

DNA Translocation through Solid-State Plasmonic Nanopores

Nano Lett. 14, 6917–6925 (2014)

View PDF

2013

F. J.H. Hol, P. Galajda, K. Nagy, R.G. Woolthuis, C. Dekker, J.E. Keymer

Spatial structure facilitates cooperation in a social dilemma: empirical evidence from a bacterial community

Plos One 8: e77042. doi:10.1371/journal.pone.0077042 (2013)

View PDF

C. Plesa, L. Cornelissen, M.W. Tuijtel, C. Dekker

Non-equilibrium folding of individual DNA molecules recaptured up to 1000 times in a solid state nanopore

Nanotechnology 24 475101 (2013)

View PDF

C. Plesa, A. Ananth, V. Linko, C. Gülcher, A. Katan, H. Dietz, C. Dekker

Ionic permeability and mechanical properties of DNA origami nanoplates on solid-state nanopores

ACS Nano 8 35–43 (2014)

View PDF

A. Mashaghi, A. Katan

A physicist’s view of DNA

De Physicus 24e 3 59-61 (2013)

View PDF

G.F. Schneider, Q. Xu, S. Hage, S. Luik, J.N.H. Spoor, S. Malladi, H. Zandbergen C. Dekker

Tailoring the hydrophobicity of graphene nanopores

Nature Communications 4 2619 (2013)

View PDF

M.T.J. van Loenhout, I. De Vlaminck, B. Flebus, J.F. den Blanken, L. Zweiffel, K.M. Hooning, J.W.J. Kerssemakers, C. Dekker

Scanning a DNA molecule for bound proteins using hybrid magnetic and optical tweezers

Plos One 8 e65329 (2013)

View PDF

Q. Xu, M.Y. Wu, G. Schneider, L. Houben, S. Malladi, C. Dekker, E. Yucelen, R. E. Dunin-Borkowski, H.W. Zandbergen

Controllable Atomic Scale Patterning of Freestanding Monolayer Graphene at Elevated Temperature

ACS Nano 7 1566-1572 (2013)

View PDF

G.V. Soni, M.P. Jonsson , C. Dekker

Periodic modulation of optical tweezers near solid-state membranes

Small 9 679 (2013)

View PDF

M.P. Jonsson , C. Dekker

Electrical Profiling of Optical Intensity Landscapes with a Plasmonic Nanopore

Nano Lett. 13 1029 (2013)

View PDF

C. Plesa, S.W. Kowalczyk, R. Zinsmeester, A. Y. Grosberg, Y. Rabin, C. Dekker

Fast Translocation of Proteins through Solid State Nanopores

Nano Lett. 13 658 (2013)

View PDF

2012

M.T.J. van Loenhout, J. Kerssemakers , I. De Vlaminck, C. Dekker

Non-bias-limited tracking of spherical particles, enabling nanometer resolution at low magnification

Biophys. J. 102 Issue 10 2362 (2012)

View PDF

J. Männik, F. Wu, F.J.H. Hol, P. Bissichia, D. Sherratt, J.E. Keymer, C. Dekker

Robustness and accuracy of cell division in Escherichia coli in diverse cell shapes

Proc. Natl. Acad. Sci. (USA) 109 6957 (2012)

View PDF

I. De Vlaminck, Th. Henighan, M.T.J. van Loenhout, D. Burnham, C. Dekker

Magnetic forces and DNA mechanics in multiplexed magnetic tweezers

PLOS One 7 e41432 (2012)

View PDF

I. De Vlaminck and C. Dekker

Recent Advances in Magnetic Tweezers

Ann. Rev. Biophys. 41 453 (2012)

View PDF

R. Vlijm, J. S.J. Smitshuijzen, A. Lusser, C. Dekker

NAP1-assisted nucleosome assembly on DNA measured in real time by single-molecule magnetic tweezers

PLOS One 7 e46306 (2012)

View PDF

S.W. Kowalczyk and C. Dekker

Salt and voltage dependence of the conductance blockade induced by translocation of DNA and RecA filaments through solid-state nanopores

in ‘Nanopores for bioanalytical applications’, Edited by J. Edel and T. Albrecht (Royal Society Chemisty, 2012)

C. Dekker

Als fysicus aan de slag in de nanobiologie

Ned. Tijdschr. Natuurk. 78, 286 (2012)

G. Schneider and C. Dekker

DNA sequencing with nanopores

Nature Biotechn. 30 326 (2012)

View PDF

I. De Vlaminck, M. T.J. van Loenhout, L. Zweifel, J. den Blanken, K. Hooning, S. Hage, J. Kerssemakers, C. Dekker

Mechanism of homology recognition in DNA recombination from dual-molecule experiments

Molec. Cell 46 616 (2012)

View PDF

S.W. Kowalczyk, D.B. Wells, A. Aksimentiev, C. Dekker

Slowing down DNA translocation through a nanopore in lithium chloride

Nano Lett.12 1038 (2012)

View PDF

A.R. Hall, J.M. Keegstra, M.C. Duch, M.C. Hersam, C. Dekker

Measuring Single-Wall Carbon Nanotubes with Solid-State Nanopores

Book chapter in ‘Nanopore-based technology: single molecule characterization and DNA sequencing’, (Ed. M. Gracheva,; Humana Press, 2011) as the volume on “Nanopore Sequencing technology” in the series ‘Methods in Molecular biology ‘ (series editor J.M. Walker) Volume 870, 2012, DOI: 10.1007/978-1-61779-773-6, p. 227-239 (2012)

F. Hol and C. Dekker

Bacteriën in nanokanalen en micro-steden

Ned. Tijdschr. Natuurk. 78, 240 (2012)

G.V. Soni and C. Dekker

Detection of Nucleosomal Substructures using Solid State Nanopores

Nano Lett. 12 3180 (2012)

View PDF

S.W. Kowalczyk and C. Dekker

Measurement of the docking time of a DNA molecule onto a solid-state nanopore

Nano Lett. 12 4159-63 (2012)

View PDF

X.J.A. Janssen, M.P. Jonsson, C. Plesa, G.V. Soni, C. Dekker, N.H. Dekker

Rapid manifacturing of low-noise membranes for nanopore sensors by Trans-chip Illumination Lithography

Nanotechnology 23 475302 (2012)

View PDF

M.T.J. van Loenhout, M.V. de Grunt, C. Dekker

Dynamics of DNA supercoils

Science 338 94-97 (2012)

View PDF

V.E. Calado, G.F. Schneider, A.M.M.G. Theulings, C. Dekker, L.M.K. Vandersypen

Formation and control of wrinkles in graphene by the wedging transfer method

Appl. Phys. Lett. 101 103116 – 103116-3 (2012)

View PDF

2011

B. Song, G.F. Schneider, Q. Xu, G. Pandraud, C. Dekker, H. Zandbergen

Atomic-scale electron-beam sculpting of defect-free graphene nanostructures

Nano Lett. 11 2247–2250 (2011)

View PDF

Stefan W. Kowalczyk, Timothy R. Blosser, Cees Dekker

Biomimetic nanopores: learning from and about nature

Trends in Biotechnology. 29 607-614 (2011)

View PDF

A.R. Hall, J. M. Keegstra, M. C. Duch, M. C. Hersam, C. Dekker

Translocation of Single-Wall Carbon Nanotubes Through Solid-State Nanopores

Nano Lett. 11 2446-50 (2011)

View PDF

S.W. Kowalczyk, A.Y. Grosberg, Y. Rabin, C. Dekker

Modeling the conductance and DNA blockade of solid-state nanopores

Nanotechnology 22 (2011) 315101. PDF Supplementary Material|https://ceesdekkerlab.nl/wp-content/uploads/Kowalczyk_4_2011.pdf

S.W. Kowalczyk and C. Dekker

Nanogaatjes voor DNA-analyse

Nederlands Tijdschrift voor Natuurkunde 77(5) 2011

View PDF

A.J. Katan and C. Dekker

High-speed AFM reveals the dynamics of single biomolecules at the nanometer scale

Cell 147 979-982 (2011)

View PDF

I. De Vlaminck, Th. Henighan, M.T.J. van Loenhout, I. Pfeiffer, J. Huijts, J. Kerssemakers, A. Katan, A. van Langen-Suurling, E. van der Drift, Claire Wyman, C. Dekker

Highly parallel magnetic tweezers by targeted DNA tethering

Nano Lett. 11 5489 (2011)

View PDF

A.R. Hall and C. Dekker

Molecular Detection and Force Spectroscopy in Solid-State Nanopores with Integrated Optical Tweezers

Book chapter to be published in ‘Nanopores: Sensing Fundamental Biological Interactions at the Single Molecule Level’ (Eds. R. Bashir, S. Iqbal; Springer, 2011).

J.T. Holthausen, M. van Loenhout, H. Sanchez, D. Ristic, S.i van Rossum-Fikkert, M. Modesti, T. Thorslund, S.C. West, C. Dekker, R. Kanaar, C. Wyman

Effect of the BRCA2 CTRD domain on RAD51 filaments analyzed by an ensemble of single molecule techniques

Nucl. Acid Res.39 6558 (2011)

View PDF

S.W. Kowalczyk, L. Kapinos, T.R. Blosser, T. Magalhaes, P. van Nies,R.Y.H. Lim, C. Dekker

Single-molecule transport across an individual biomimetic nuclear pore complex

Nature Nanotechnology 6, 433–438 (2011). PDF Supplementary Material|https://ceesdekkerlab.nl/wp-content/uploads/Kowalczyk_3_2011.pdf

2010

I. De Vlaminck, I. Vidic, M. van Loenhout, R. Kanaar, J.H.G. Lebbink, C. Dekker

Torsional regulation of hRPA-induced unwinding of double stranded DNA

Nucl. Acid Res. 38 4133-4142 (2010)

View PDF

S.W. Kowalczyk, M.W. Tuijtel, S.P. Donkers, C. Dekker

Unraveling Single-Stranded DNA in a Solid-State Nanopore

Nano Lett 10 1414–1420 (2010)

View PDF

G.F. Schneider, V.E. Calado, H. Zandbergen, L.M.K. Vandersypen, C. Dekker

Wedging transfer of nanostructures

Nano Lett. 10 1912–1916 (2010)

View PDF

A.R. Hall, A. Scott, D. Rotem, K.l Mehta, H. Bayley, C. Dekker

Hybrid pore formation by directed insertion of alpha hemolysin into solid-state nanopores

Nature Nanotechnology 5 874–877 (2010)

View PDF

G.F. Schneider, S.W. Kowalczyk, V. E. Calado, G. Pandraud, H. Zandbergen, L.M.K. Vandersypen, C. Dekker

DNA translocation through graphene nanopores

Nano Lett. 10 3163–3167 (2010)

View PDF

I. Heller, S. Chatoor, J. Männik, M.A.G. Zevenbergen, C. Dekker, S.G. Lemay

Influence of electrolyte composition on liquid-gated carbon-nanotube and graphene transistors

J. Am. Chem. Soc. 132 17149–17156 (2010)

View PDF

A .R. Hall, J.M. Keegstra, M.C. Duch, M.C. Hersam, C. Dekker

Measuring Single-Wall Carbon Nanotubes with Solid-State Nanopores

Book chapter to be published in ‘Nanopore-based technology: single molecule characterization and DNA sequencing’, (Ed. M. Gracheva,; Humana Press, 2011) as the volume on “Nanopore Sequencing technology” in the series ‘Methods in Molecular biology ‘ (series editor J.M. Walker)

J. Männik, F. Sekhavati, J. E. Keymer, C. Dekker

Bacteria in submicron channels and microvalves

Proc. μTAS2010 (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 3-7 October 2010 Groningen The Netherlands) p. 1376-1378 (2010)

View PDF

M. van den Hout, A.R. Hall, M.-Y. Wu, H.W. Zandbergen, C. Dekker, N.H. Dekker

Controlling Nanopore Size, Shape, and Stability

Nanotechnology 21 115304 (2010)

View PDF

I. Heller, S. Chatoor, J. Männik, M.A.G. Zevenbergen, J.B. Oostinga, A.F. Morpurgo, C. Dekker, S.G. Lemay

Charge Noise in Graphene Transistors

Nano Lett. 10 1563–1567 (2010)

View PDF

D. Stein, Z. Deurvorst, F.H.J. van der Heyden, W.J.A. Koopmans, A. Gabel, C. Dekker

Electrokinetic Concentration of DNA Polymers in Nanofluidic Channels

Nano Lett. 10 765–772 (2010)

View PDF

I. Dujovne, J. Kerssemakers, G. Cappello, C. Dekker

Interference technique for minimally invasive, subnanometer, microsecond measurements of displacements

Rev. Sci. Instrum. 81 016103 (2010)

View PDF

S.W. Kowalczyk, A.R. Hall, C. Dekker

Detection of local protein structures along DNA using solid-state nanopores

Nano Lett. 10 324–328 (2010)

View PDF

2009

R.M.M Smeets, S.W. Kowalczyk, A.R. Hall, N.H. Dekker, C. Dekker

Translocation of RecA-coated Double-Stranded DNA Through Solid-State Nanopores

Nano Letters 9 (9): 3089-3095 (2009)

View PDF

M.Y. Wu, R.M.M Smeets, M. Zandbergen, U. Ziese, D. Krapf, P.E. Batson, N.H. Dekker, C. Dekker, H.W. Zandbergen

Control of Shape and Material Composition of Solid-State Nanopores

Nano Letters 9 479-484 (2009)

View PDF

I. Heller, J. Mannik, S.G. Lemay, C. Dekker

Optimizing the Signal-to-Noise Ratio for Biosensing with Carbon Nanotube Transistors

Nano Letters 9 377-382 (2009)

View PDF

R.M.M. Smeets, N.H. Dekker, C. Dekker

Low Frequency Noise in Solid-State Nanopores

Nanotechnology 20 095501 (2009)

View PDF

S. van Dorp, U.F. Keyser, N.H. Dekker, C. Dekker, Serge G. Lemay

Origin of the electrophoretic force on DNA in solid-state nanopores

Nature Physics 5 347-351 (2009)

View PDF

G.M. Skinner, M. van den Hout, O. Broekmans, C. Dekker, N.H. Dekker

Distinguishing Nucleic Acids Using Solid-State Nanopores

Nano Letters, 9 (8), 2953-2960 (2009) PDF Supporting Information|https://ceesdekkerlab.nl/wp-content/uploads/2009_Skinner_Hout.pdf

J. Männik, R. Driessen, P. Galajda, J. E. Keymer, C. Dekker

Bacterial Growth and Motility in Sub-Micron Constrictions

Proceedings of the National Academy of Sciences 106 (35) 14861-6 (2009)

View PDF

M.T.J. van Loenhout, T. van der Heijden, R. Kanaar, C. Wyman, C. Dekker

Dynamics of RecA filaments on single stranded DNA

Nucleic Acids Research 37 4089-4099 (2009)

View PDF

D. Stein, M.G.L. van den Heuvel, C. Dekker

Transport of ions, DNA polymers, and microtubules in the nanofluidic regime

Book chapter in ‘Nanofluidics: nanoscience and nanotechnology’ edited by J.B. Edel and A.J. deMello (RSC Publ Cambridge 2009) p. 1-30

View PDF

I.Heller, S. Chatoor, J. Männik, M. A. G. Zevenbergen, C. Dekker, S. G. Lemay

Comparing the weak and strong gate-coupling regimes for nanotube and graphene transistors

Physica Status Solidi – Rapid Research Letters 3 190 – 192 (2009)

View PDF

I. Heller, W.T.T. Smaal, S.G. Lemay, C. Dekker

Probing macrophage activity with carbon nanotube sensors

Small 5 2528-2532 (2009)

View PDF

A.R. Hall, S. van Dorp, S.G. Lemay, C. Dekker

Electrophoretic Force on a Protein-Coated DNA Molecule in a Solid-State Nanopore

Nano Letters 9 4441-4445 (2009)

View PDF

2008

R. Seidel, J.P.G. Bloom, C. Dekker, and M.D. Szczelkun

Motor step size and ATP coupling efficiency of the dsDNA translocase EcoR124I

EMBO J. 27, 1388–1398

M.G.L. van den Heuvel, R. Bondesan, M. Cosentino Lagomarsino, C. Dekker

Single-molecule observation of anomalous electro-hydrodynamic orientation of microtubules

Phys. Rev. Lett.. 101, 118301 (2008)

View PDF

E. Šišáková, M. Weiserová, C. Dekker, R. Seidel, M. D. Szczelkun

The Interrelationship of Helicase and Nuclease Domains during DNA Translocation by the Molecular Motor EcoR124I

J. Mol. Biol. 384, 1273–1286 (2008)

View PDF

F.J.M. Hoeven, F.S. Meijer, C. Dekker, S.P.J. Albracht, H.A. Heering, S.J. Lemay

Towards single-enzyme voltammetry: [NiFe]-hydrogenase protein film voltammetry at nanoelectrodes

ACS Nano 2 , 2497–2504 (2008)

P. McEuen and C. Dekker

Synthesizing the future

ACS Chemical Biology 3, 10–12 (2008)

View PDF

I. Dujovne, M. van den Heuvel, Y. Shen, M. de Graaff, C. Dekker

Velocity Modulation of Microtubules in Electric Fields

Nano Letters 8 (12) 4217-4220 (2008)

View PDF

I. Heller, A. M. Janssens, J. Männik, E. D. Minot, S. G. Lemay, C. Dekker

Identifying the Mechanism of Biosensing with Carbon Nanotube Transistors

Nano Letters 8 (2) 591-595 (2008)

View PDF

M.G.L. van den Heuvel, M.P. de Graaff, C. Dekker

Microtubule curvatures under perpendicular electric forces reveal a low persistence length

Proceedings of the National Academy of Sciences 105: 7941-6 (2008)

View PDF

J. Männik, I. Heller, A.M. Jannsens, S.G. Lemay, C. Dekker

Charge noise in liquid-gated single-wall carbon nanotube Transistors

Nano Letters 8 (2) 685-688 (2008)

View PDF

F.J.M. Hoeben, I. Heller, S.P.J. Albracht, C. Dekker, S.G. Lemay, H.A. Heering

Polymyxin-coated Au and carbon nanotube electrodes for stable [NiFe]-hydrogenase film voltammetry

Langmuir 24 5925-5931 (2008)

View PDF

T. van der Heijden, M. Modesto, S. Hage, R. Kanaar, C. Wyman, C. Dekker

Homologous recombination in real time: DNA strand exchange by RecA

Molecular Cell, 30, 530-538 (2008) PDF Supplementary Material|https://ceesdekkerlab.nl/wp-content/uploads/2008_van-der-Heijden.pdf

T. van der Heijden and C. Dekker

Monte Carlo simulations of protein assembly, disassembly, and linear motion on DNA

Biophysical Journal, doi:10.1529/biophysj.108.135061, (2008) PDF Monte Carlo code|https://ceesdekkerlab.nl/wp-content/uploads/2008_van-der-Heijden02.pdf

D.J. Bonthuis, C. Meyer, D. Stein, C. Dekker

Conformation and dynamics of DNA confined in slit-like nanofluidic channels

Phys. Rev. Lett. 101, 108303 (2008)

M. van den Hout, S. Hage, C. Dekker, N.H. Dekker

End-Joining Long Nucleic Acid Polymers

Nucleic Acids Research 36e104 (2008)

View PDF

R. Smeets, U. F. Keyser, N. H. Dekker, C. Dekker

Noise in Solid-state Nanopores

Proceedings of the National Academy of Sciences

2007

C. Dekker

Solid-state nanopores

Nature Nanotechnology 2, 209–215(2007)

View PDF

T. van der Heijden, R. Seidel, M. Modesti, R. Kanaar, C. Wyman, C. Dekker

Real-time assembly and disassembly of human RAD51 filaments on individual DNA molecules

Nucleic Acids Research 35: 5646-5657 (2007): doi: 10.1093/nar/gkm629 (2007)

View PDF

E.D. Minot, A.M. Janssens, I. Heller, H.A. Heering, C. Dekker, S. G. Lemay

Carbon nanotube biosensors: the critical role of the reference electrode

Applied Physics Letters

View PDF

M.G.L. van den Heuvel, S. Bolhuis, C. Dekker

Persistance length measurement from stochastic single-molecule trajectories

Nano Letters

M.G.L. van den Heuvel, C. Dekker

Motor Proteins at Work for Nanotechnology

Science 317: 333-336 (2007)

View PDF

F.H.J. van der Heyden, D.J. Bonthuis, D. Stein, C. Meyer, C. Dekker

Power Generation by Pressure-Driven Transport of Ions in Nanofluidic Channels

Nano Letters 7: 1022-1025 (2007)

View PDF

M. Modesti, D. Ristic, T. van der Heijden, C. Dekker, J. van Mameren, E.J.G. Peterman, G.J.L. Wuite, R. Kanaar, C. Wyman

Fluorescent Human RAD51 Reveals Multiple Nucleation Sites and Filament Segments Tightly Associated along a Single DNA Molecule

Structure

T. van der Heijden, F. Moreno-Herrero, R. Kanaar, C. Wyman, C. Dekker

AFM Tip-Induced Dissociation of RecA-dsDNA Filaments

NanoLetters

B.J. LeRoy, I. Heller, V.K. Pahilwani, C. Dekker, S.G. Lemay

Simultaneous electrical transport and scanning tunneling spectroscopy of carbon nanotubes

Nano Letters : Accepted (2007)

View PDF

P.A. Wiggins, T. Van der Heijden, F. Moreno-Herrero, A. Spakowitz, R. Phillips, J. Widom, C. Dekker, P.C. Nelson

High flexibility of DNA on short length scales probed by atomic force microscopy

Nature Nanotechn. 1, 137-141 (2006)

M.G.L. van den Heuvel, M.P. de Graaff, S.G. Lemay, C. Dekker

Electrophoresis of individual Microtubules in Microchannels

Proceedings of the National Academy of Science USA 104 (19): 7770-7775 (2007)

View PDF

2006

M.G.L. van den Heuvel, M.P. de Graaff, C. Dekker

Molecular sorting by electrical steering of microtubules in kinesin-coated channels

Science: 312 (5775): 910-914 (2006)

View PDF

P.D. Jarillo-Herrero, J.Kong, H.S.J. van der Zant, C. Dekker, L.P. Kouwenhoven, S. De Franceschi

Tunable orbital pseudospin and multi-level Kondo effect in carbon nanotubes

Properties of Novel Nanostructures AIP conference proceedings H Kuzmany, J Fink, M Mehring, & S Roth (Eds.) 786: 482-489 (2005) Kirchberg, Austria: AIP.: undefined

L.K. Stanley, R. Seidel, C. van der Scheer, N.H. Dekker, M.D. Szczelkun, C. Dekker

When a helicase is not a helicase: dsDNA tracking by the motor protein EcoR124I

EMBO Journal: 25 (10): 2230-2239 (2006)

View PDF

I. Heller, J. Kong, K. A. Williams, C. Dekker, S.G. Lemay

Electrochemistry at Single-Walled Carbon Nanotubes: The Role of Band Structure and Quantum Capacitance

Journal of the American Chemical Society: 128 (22): 7353-7359 (2006)

View PDF

U.F. Keyser, B.N. Koeleman, D. Krapf, R.M.M. Smeets, S.G. Lemay, N.H. Dekker, C. Dekker

Direct force measurements on DNA in a solid-state nanopore

Nature Physics: 2 (7): 473-477 (2006)

View PDF

R.M.M. Smeets, U.F. Keyser, M.Y. Wu, N.H. Dekker, C. Dekker

Nanobubbles in solid-state nanopores

Physical Review Letters: 97 (8): Art. No. 088101 (2006)

View PDF

D. Krapf, B.M. Quinn, M.-Y. Wu, H.W. Zandbergen, C. Dekker, S.G. Lemay

Experimental observation of nonlinear ionic transport at the nanometer scale

Nano Letters: 6 (11): 2531-2535 (2006)

View PDF

H. A. Heering, K.A. Williams, S. de Vries, C. Dekker

Specific Vectorial Immobilization of Oligonucleotide-Modified Yeast Cytochrome c on Carbon Nanotubes

ChemPhysChem: 7 (8): 1705-1709 (2006)

View PDF

F.H.J. van der Heyden, D.J. Bonthuis, D. Stein, C. Meyer, C. Dekker

Electrokinetic energy conversion effciency in nanofluidic channels

Nano Letters: 6 (10): 2232-2237 (2006)

View PDF

U. F. Keyser, J. van der Does, C. Dekker, N.H. Dekker

Optical tweezers for force measurements on DNA in nanopores

Review of Scientific Instruments: 77 (10): Art. No. 105105 (2006)

View PDF

T. van der Heijden, F. Moreno-Herrero, R. Kanaar, C. Wyman, C. Dekker

Comment on: “Direct and Real-Time Visualization of the Disassembly of a Single RecA-DNA-ATP S Complex Using AFM Imaging in Fluid”

Nano Letters (1): 137-141 (2006) PDF: undefined

P.A. Wiggins, T. van der Heijden, F.Moreno-Herrero, A. spakowitz, R. Phillips, J. Widom, C. Dekker, P.C. Nelson

High flexibility of DNA on short length scales probed by atomic force microscopy

Nature Nanotechnology: 1(): 137-141 (2006)

View PDF

D. Stein, F.H.J. van der Heyden, W. Koopmans, C. Dekker

Pressure-driven transport of DNA polymers confined in fluidic channels

Proceedings of the National Academy of Science USA 103 (43): 15853-15858 (2006)

View PDF

F.H.J. van der Heyden, D. Stein, K. Besteman, S.G. Lemay, C. Dekker

Charge inversion at high ionic strength studied by streaming currents

Physical Review Letters: 96 (22): Art. No. 224502 (2006)

View PDF

R.M.M. Smeets, U.F. Keyser, D. Krapf, M.Y. Wu, N.H. Dekker, C. Dekker

Salt dependence of ion transport and DNA translocation through solid-state nanopores.

Nano Letters: 6 (1): 89-95 (2006)

View PDF

D. Krapf, M.Y. Wu, R. M. M. Smeets, H. W. Zandbergen, C. Dekker, S.G. Lemay

Fabrication and Characterization of Nanopore-Based Electrodes with Radii down to 2 nm.

Nano Letters: 6 (1): 105-109 (2006)

View PDF

S. Sapmaz, P. Jarillo-Herrero, Ya. M. Blanter, C. Dekker, and H.S.J. van der Zant

Tunneling in suspended carbon nanotubes assisted by stretching modes

Physical Review Letters: 96 (2): Art. No. 026801 (2006)

View PDF

M.G.L. van den Heuvel, M.P. de Graaff, C. Dekker

Op afstand bestuurbare eiwit

Nederlands Tijdschrift voor Natuurkunde 1-4 September 2006

View PDF

2005

P. Jarillo-Herrero, J. Kong, H. S.J. van der Zant, C. Dekker, L. P. Kouwenhoven, S. De Franceschi

Electronic transport spectroscopy of carbon nanotubes in a magnetic field

Physical Review Letters: 94 (15): Art. No. 156802 (2005)

View PDF

A.J. Storm, J. Chen, H.W. Zandbergen, C. Dekker

Translocation of double-strand DNA through a siliconoxide nanopore

Physical Review E: 71 (5): Art. No. 051903 (2005)

View PDF

H.W. Zandbergen, B.J.H.A. van Duuren, P.F.A. Alkemade, G. Lientschnig, O.Vasquez, C. Dekker, F.D. Tichelaar

Sculpting nano-electrodes with a transmission electron beam for electrical and geometrical characterization of nanoparticles.

Nano Letters: 5 (3): 549-553 (2005)

View PDF

A. J. Storm, C. Storm, J. Chen, H.W. Zandbergen, J.F. Joanny, C. Dekker

Fast DNA translocation through a solid-state nanopore

Nano Letters: 5 (7): 1193 -1197 (2005)

View PDF

S.G. Lemay, D.M. van den Broek, A.J. Storm, D. Krapf, R.M.M. Smeets, H.A. Heering, C. Dekker

Lithographically fabricated nanopore-based electrodes for electrochemistry

Analytical Chemistry: 77 (6): 1911-1915 (2005)

View PDF

J. Kong, B.J. LeRoy, S.G. Lemay, C. Dekker

Integration of a gate electrode into carbon nanotube devices for scanning tunneling microscopy

Applied Physics Letters: 86 (11): Art. No. 112106 (2005)

View PDF

S. Sapmaz, P. Jarillo-Herrero, J. Kong, C. Dekker, L.P. Kouwenhoven, H.S.J. van der Zant

Electronic excitation spectrum of metallic carbon nanotubes

Physical Review B: 71 (15): Art. No. 153402 (2005)

View PDF

J.A. Abels, F. Moreno-Herrero, T. van der Heijden, C. Dekker, N.H. Dekker

Single-Molecule Measurements of the Persistence Length of double-stranded RNA

Biophysical Journal: 88 (4): 2737-2744 (2005)

View PDF

M.G.L. van den Heuvel, C.T. Butcher, S.G. Lemay, S. Diez, C. Dekker

Electrical docking of microtubules for kinesin-driven motility in nanostructures

Nano Letters: 5 (2): 235-241 (2005)

View PDF

I. Heller, J. Kong, H. A. Heering, K. Williams, S. Lemay, C. Dekker

Individual single-walled carbon nanotubes as nanoelectrodes for electrochemistry

Nano Letters: 5 (1) 137-142 (2005)

View PDF

D.A. Koster, V. Croquette, C. Dekker, S. Shuman, N.H. Dekker

Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB

Nature: 434 (7033): 671-674 (2005)

View PDF

P. Jarillo-Herrero, J. Kong, H. S.J. van der Zant, C. Dekker, L. P. Kouwenhoven, S. De Franceschi

Orbital Kondo effect in carbon nanotubes

Nature: 434 (7032): 484-487 (2005)

View PDF

A. J. Storm, J.H. Chen, X.S. Ling, H.W. Zandbergen, C. Dekker

Electron-beam-induced deformations of SiO2 nanostructures

Journal of Applied Physics: 98 (1): Art. No. 014307 (2005)

View PDF

B.M. Quinn, C. Dekker, S.G. Lemay

Electrodeposition of noble metals nanoparticles on carbon nanotubes

Journal of the American Chemical Society: 127 (17): 6146-6147 (2005)

View PDF

B.J. LeRoy, J. Kong, V.K. Pahilwani, C. Dekker, S.G. Lemay

Three-terminal scanning tunneling spectroscopy of suspended carbon nanotubes

Physical Review B: 72 (7): Art. No. 075413 (2005)

View PDF

T. van der Heijden, J. van Noort, H. van Leest, R. Kanaar, C. Wyman, N.H. Dekker, C. Dekker

Torque-limited RecA polymerization on dsDNA

Nucleic Acids Research: 33 (7): 2099-2105 (2005)

View PDF

D. Ristic, M. Modesti, T. van der Heijden, S.J.T. van Noort, C. Dekker, R. Kanaar, C. Wyman

Human Rad51 filaments on double- and single-stranded DNA: correlating regular and irregular forms with recombination function.

Nucelic Acids Research: 33 (10): 3292-3302 (2005)

View PDF

M.G.L. van den Heuvel, C.T. Butcher, R.M.M. Smeets, S. Diez, C. Dekker

High Rectifying Efficiencies of Microtubule Motility on Kinesin-Coated Gold Nanostructures

Nano Letters: 5 (6): 1117-1122 (2005)

View PDF

U.F. Keyser, D. Krapf, B. N. Koeleman, R. M. M. Smeets, N. H. Dekker, C. Dekker

Nanopore tomography of a laser focus

Nano Letters: 5 (11): 2253-2256 (2005)

View PDF

F.H.J. van der Heyden, D. Stein, C. Dekker

Streaming currents in a single nanofluidic channel

Physical Review Letters: 95 (11): Art. No. 116104 ()

View PDF

R. Seidel, J. G. P. Bloom, J. van Noort, C. F. Dutta, N. H. Dekker, K. Firman, M. D. Szczelkun, C. Dekker

Dynamics of initiation, termination and reinitiation of DNA translocation by the motor protein EcoR124I

EMBO Journal: 24 (23): 4188-4197 (2005)

View PDF

F. Moreno-Herrero, M. de Jager, N. H. Dekker, R. Kanaar, C. Wyman, C. Dekker

Meso-scale conformational changes in Rad50/Mre11 upon DNA binding: implications for DNA tethering

Nature: 437 (7057): 440-443 (2005) PDF Movie 1 & Movie 2|https://ceesdekkerlab.nl/wp-content/uploads/2005_Moreno-2.pdf

F. Moreno-Herrero, L. Holtzer, D. Koster, S. Shuman, C. Dekker, N.H. Dekker

Atomic force microscopy shows that vaccinia topoisomerase IB generates filaments on DNA in a cooperative fashion

Nucleic Acids Research: 33 (18): 5945-5953 (2005)

View PDF

2004

P. Jarillo-Herrero, S. Sapmaz, C. Dekker, L.P. Kouwenhoven, H.S.J. van der Zant

Electron-hole symmetry in a semiconducting carbon nanotube quantum dot

Nature: 429 (6990): 389-392 (2004)

View PDF

N. H. Dekker, J. A. Abels, P. T. M. Veenhuizen, C. Dekker

Joining of Long Double-stranded RNA Molecules through Controlled Overhangs

Nucleic Acids Research: 32 (18): Art. No. e140 (2004)

View PDF

S.J.T. van Noort, T. van der Heijden, C. F. Dutta, W. Lisle, K. Firman, C. Dekker

Initiation of Translocation by Type I Restriction-Modification Enzymes is Associated with a Short DNA Extrusion

Nucleic Acids Research: 32 (22): 6540-6547 (2004)

View PDF

P. Jarillo-Herrero, S. Sapmaz, C. Dekker, L.P. Kouwenhoven, H.S.J. van der Zant

A Few Electron-Hole Semiconducting Carbon Nanotube Quantum Dot

Proceedings of the International Winterschool on Electronic Properties of Novel Materials (Kirchberg, 2004): undefined

R. den Dulk, K.A. Williams, P. T.M. Veenhuizen, M. de Koning, M. Overhand, C. Dekker

Self-Assembly Experiments with PNA-Derivatized Carbon Nanotubes

AIP Proceedings of the Symposium on DNA-Based Molecular Electronics, May 13-15, 2004, Jena, Germany: undefined

S.J.T. van Noort, S. Verbrugge, N. Goosens, C. Dekker, R.T. Dame

Dual Architectural Roles of HU: Formation of Flexible Hinges and Rigid Filaments

Proceedings of the National Academy of Science USA: 101(18): 6969-6974 (2004)

View PDF

B.J. LeRoy, S.G. Lemay, J. Kong, C. Dekker

Scanning tunneling spectroscopy of suspended single-wall carbon nanotubes

Applied Physics Letters: 84 (21): 4280-4282 2004

View PDF

D. Stein, M. Kruithof, C. Dekker

Surface-charge-governed ion transport in nanofluidic channels

Physical Review Letters: 93 (3): Art. No. 035901 (2004)

View PDF

R. Seidel, J. van Noort, C. van der Scheer, J. Bloom, N. Dekker, C. F. Dutta, A. Blundell, T. Robinson, K. Firman, C. Dekker

Real-Time Observation of DNA Translocation by the Type I Restriction-Modification Enzyme EcoR124I

Nature Structural & Molecular Biology: 11 (9): 838-843 (2004)

View PDF

H. A. Heering, F.G.M. Wiertz, C. Dekker, S. de Vries

Direct immobilization of native yeast iso-1 cytochrome c on bare gold: fast electron relay to redox enzymes and zeptomole protein-film voltammetry

Journal of the American Chemical Society: 126 (35): 11103-11112 (2004)

View PDF

J. Kong, L.P. Kouwenhoven, C. Dekker

Quantum change for nanotubes

Physics World July issue: 17 (2004) WEB LINK: undefined

B.J. , S.G. Lemay, J. Kong, C. Dekker

Electrical generation and absorption of phonons in carbon nanotubes

Nature: 432 (7015): 371-374 (2004)

View PDF

2003

S.J.T. van Noort, T. van der Heijden, M. de Jager, C. Wyman, R. Kanaar, C. Dekker

The coiled-coil of the human Rad50 DNA repair protein contains specific segments of increased flexibility

Proceedings of the National Academy of Science USA: 100 (13): 7581-7586 (2003) cover article

View PDF

J.-O Lee, G. Lientschnig, F.G.M. Wiertz, M. Struijk, R.A.J. Janssen, R. Egberink, D.N. Reinhoudt, A. Grimsdale, K. Mullen, P. Hadley, C. Dekker

Electrical transport study of phenylene-based p-conjugated molecules in a three-terminal geomtery

Annals New York Acad. Sciences, accepted for publication: undefined

Th. Maltezopoulos, A. Kubetzka, M. Morgenstern, R. Wiesendanger, S.G. Lemay, C. Dekker

Confined states in extended metallic nanotubes

Applied Physics Letters: 83 (5): 1011-1013 (2003)

View PDF

A.J. Storm, J.H. Chen, X.S. Ling, H.W. Zandbergen, C. Dekker

Fabrication of solid-state nanopores with single nanometer precision

Nature Materials: 2 (8): 537-540 (2003)

View PDF

A. Filoramo, C. Dekker, U. Sivan, C. Schönenberger, M.E. Michel-Beyerle

Highlights from DNA-based electronic project

Phantoms Newsletter Issue 10/11: 4-6 (2003): undefined

S.J. Tans, R.G. Miedema, L.J. Geerligs, C. Dekker, J. Wu, D. Neher, G. Wegner

Electronic transport in monolayers of phthalocyanine polymers

Nanotechnology: 14 (9): 1043-1050 (2003)

View PDF

K. Besteman, J.-O Lee, F.G.M. Wiertz, H.A. Heering, C. Dekker

Enzyme-coated carbon nanotubes as single-molecule biosensors

Nano Letters: 3 (6): 727-730 (2003)

View PDF

C. Dekker

Nanotechnologie, fascinatie voor het kleine

Diesrede, 161ste Dies Natalis, 10 januari 2003, TU Delft: undefined

J.-O Lee, G. Lientschnig, F.G.M. Wiertz, M. Struijk, R.A.J. Janssen, R. Egberink, D.N. Reinhoudt, P. Hadley, C. Dekker

Absence of strong gate effects in electrical measurements on phenylene-based conjugated molecules

Nano Letters: 3 (2): 113-117 (2003)

View PDF

2002

M. Thorwart, M. Grifoni, H.W.Ch. Postma, C. Dekker

Correlated tunneling in intramolecular carbon nanotube quantum dots.

Physical Review Letters: 89 (19): 196402 (2002)

View PDF

A.W. Dunn, E. D. Svensson, C. Dekker

Scanning tunneling spectroscopy of C60 adsorbed on Si(100)-(2×1).

Surface Science: 498 (3): 237-243 (2002)

View PDF

J.W. Janssen, S.G. Lemay, L.P. Kouwenhoven, C. Dekker

Scanning tunneling spectroscopy on crossed carbon nanotubes.

Physical Review B: 65 (11): Art. No. 115423 (2002)

View PDF

G. Cuniberti, L. Craco, D. Porath, C. Dekker

Backbone-induced semiconducting behavior in short DNA wires

Physical Review B: 65 (24): Art. No. 241314 (2002)

View PDF

T. Nakanishi, A. Bachtold, C. Dekker

Transport through the interface between a semiconducting carbon nanotube and a metal electrode

Physical Review B: 66 (7): Art. No. 073307 (2002)

View PDF

A. Bachtold, P. Hadley, T. Nakanishi, C. Dekker

Logic circuits with carbon nanotubes

AIP Conference Proceedings: 633: 502-507 (2002)

K.A. Williams, P.T.M. Veenhuizen, B.G. de la Torre, R. Eritja, C. Dekker

Towards DNA-Mediated Self Assembly of Carbon Nanotube Molecular Devices

AIP Conference Proceedings: 633: 444-448 (2002)

K.A. Williams, P.T.M. Veenhuizen, B.G. de la Torre, R. Eritja, and C. Dekker

Carbon Nanotubes with DNA recognition

Nature: 420 (6917): 761 (2002)

View PDF

2001

C. Dekker, M. A. Ratner

Electronic properties of DNA.

Physics World: 14 (8): 29-33 (2001)

View PDF

A. Bachtold, P. Hadley, C. Dekker

Logic circuits with carbon nanotube transistors Science 294, 1317 (2001)

undefined: undefined

S.G. Lemay, J.W. Janssen, M. van den Hout, M. Mooij, M.J. Bronikowski, P.A. Willis, R.E. Smalley, L.P. Kouwenhoven, C. Dekker

Two-dimensional imaging of electronic wavefunctions in carbon nanotubes.

Nature 412 (6847): 617-620 (2001) cover article

View PDF

H.W. Ch. Postma, T.F. Teepen, Z. Yao, C. Dekker;

1/f noise in carbon nanotubes.

Electronic correlations: from meso- to nano-physics: Proceedings of the XXXVIth Rencontres de Moriond, Th. Martin and G. Montambaux, Les Ulis (eds), EDP Sciences (France), January 20-27: 433-436, 2001

M. de Jager, S.J.T. van Noort, D.C. van Gent, C. Dekker, R. Kanaar, C. Wyman

Human Rad50/Mre11 is a flexible complex that can tether DNA ends.

Molecular Cell: 8 (5): 1129-1135 (2001) cover article

View PDF

C. Dekker

Single-molecule electronics from carbon nanotubes to DNA.

Nova Acta Leopoldina Supplementum: 17: 27 (2001).

Z. Yao, C. Dekker, Ph. Avouris

Electrical transport through single-wall carbon nanotubes.

M.S. Dresselhaus, G. Dresselhaus, Ph. Avouris (eds.), Carbon Nanotubes; Topics in Applied Physics,: vol. 80, Springer Verlag, Berlin, 2001, p. 147-171. ISSN: 0303-4216.

P. Hadley, C.P. Heij, G. Lientschnig, T.F. Teepen, H.W.Ch. Postma, C. Dekker

Single-electron effects in metals and nanotubes for nanoscale circuits.

Proceedings of the MIOP – The German Wireless Week, 11th Conference on Microwaves, Radio Communication and Electromagnetic Compatibility, Stuttgart, Germany, May 8-10, 2001, p. 408-412. ISBN: 3-924651-91-4.: undefined

H.W.Ch. Postma, T.F. Teepen, Z. Yao, M. Grifoni, C. Dekker

Carbon nanotubes single-electron transistors at room temperature.

Science: 293 (5527): 76-79 (2001)

View PDF

J.W. Janssen, S. G. Lemay, M. van den Hout, M. Mooij, L. P. Kouwenhoven, C. Dekker

Scanning tunneling spectroscopy on a carbon nanotube buckle.

Proceedings of the American Institute of Physics Conference, H. Kuzmany, S. Roth, M. Mehring, J. Fink (eds.): Kirchberg, Oostenrijk, March 3-10 591: 293-297 (2001)

A.J. Storm, S.J.T. van Noort, S. de Vries, C. Dekker

Insulating behavior for DNA molecules between nanoelectrodes.

Applied Physics Letters: 79 (23): 3881-3883 (2001)

View PDF

M. van den Hout, J.W. Janssen

Elektrongolven in koolstof nanobuisjes.

Nederlandse Tijdschriften voor Natuurkunde: 67 (10): 294-297 (2001)

2000

O.C. Mantel, F. Chalin, C. Dekker, H.S.J. van der Zant, Y.I. Latyshev, B. Pannetier, P. Monceau

Charge-density-wave current conversion in submicron NbSe3 wires

Physical Review Letters: 84 (3): 538-541 (2000)

View PDF

L.C. Venema, V. Meunier, Ph. Lambin, C. Dekker

Atomic structure of carbon nanotubes from scanning tunneling microscopy

Physical Review B: 61 (4): 2991-2996 (2000)

View PDF

H.W.Ch. Postma, Z. Yao, C. Dekker

Electron addition and excitation spectra of individual single-wall carbon nanotubes

Journal of Low Temperature Physics: 118 (5-6): 495-507 (2000)

View PDF

S. Rogge, A. W. Dunn, T. Melin, C. Dekker, L.J. Geerligs

Electrical transport through ultrathin ordered K3C60 films on Si

Carbon: 38 (11-12): 1647-1651 (2000)

View PDF

Z. Yao, C.L. Kane, C. Dekker

High-field electrical transport in single-wall carbon nanotubes

Physical Review Letters: 84 (13): 2941-2944 (2000)

View PDF

Ph. Lambin, A.A. Lucas, S. Amelinckx, C. Dekker

Determination of the helicity of the nanotubes

In Nanotubular structures, characterization and simulation at the atomic scale , edited by A. Loiseau, A. Rubio, and F. Willaime: undefined

H.W.Ch. Postma, A. Sellmeijer, C. Dekker

Manipulation and imaging of individual single-wall carbon nanotubes with an atomic force microscope

Advanced Materials: 12 (17): 1299-1302 (2000)

View PDF

S.J. Tans and C. Dekker

Molecular Transistors – Potential modulations along carbon nanotubes

Nature: 404 (6780): 834-835 (2000)

View PDF

S.P. Rubio, Apell, L.C. Venema, C. Dekker

A mechanism for cutting carbon nanotubes with a scanning tunneling microscope

The European Physical Journal B: 17 (2): 301-308 (2000)

View PDF

L.C. Venema, J.W. Janssen, M.R. Buitelaar, J.W.G. Wildoer, S. Lemay, L.P. Kouwenhoven, C. Dekker

Spatially resolved scanning tunneling spectroscopy on single-walled carbon nanotubes

Physical Review B: 62 (8): 5238-5244 (2000)

View PDF

L.C. Venema and C. Dekker

Carbon nanotubes

In New Frontiers of Science and Technology , edited by L. Esaki (Frontiers Science Series No. 31, Universal Acad. Press, 293-300 (2000): undefined

D. Porath, A. Bezryadin, S. de Vries, C. Dekker

Direct Measurements of Electrical Transport Through DNA Molecules

Proceedings International Winterschool on Electronic Properties of Novel: Materials Ed. H. Kuzmany et al. AIP Conference Proceedings 544 452 (2000)

View PDF

H.W.Ch. Postma, M. de Jonge, Z. Yao, C. Dekker;

Electrical transport through carbon nanotube junctions created by mechanical manipulation.

Physical Review B: 62 (16): R10653-R10656 (2000)

View PDF

1999

L.C. Venema, J.W.G. Wildoer, S.J. Tans, J.W. Janssen, H. Temminck Tuinstra, L. P. Kouwenhoven, C. Dekker

Imaging electron wave functions of quantized energy levels in carbon nanotubes

Science: 283 (5398): 52-55 (1999)

View PDF

C. Dekker

Carbon nanotubes as molecular quantum wires

Physics Today,: 52 (5): 22-28 (1999)

O.C. Mantel, C.A.W. Bal, C. Langezaal, C. Dekker, H.S.J. van der Zant

Lithographic patterned wires of the charge-density-wave conductor Rb0.30Mo03

Journal of Applied Physics: 86 (8): 4440-4445 (1999)

View PDF

O.C. Mantel, F. Chalin, C. Dekker, H.S.J. van der Zant, Y.I. Latyshev, B. Pannetier, P. Monceau

Submicron structures of the charge-density-wave conductor NbSe3

Synthetic Metals: 103 (1-3): 2612-2615 (1999)

View PDF

O.C. Mantel, C.A.W. Bal, C. Langezaal, C. Dekker, H.S.J. van der Zant

Sliding charge-density-wave transport in micron-sized wires of Rb0.30Mo03

Physical Review B: 60 (8): 5287-5294 (1999)

View PDF

Z. Yao, H.W.Ch. Postma, L. Balents, C. Dekker

Carbon nanotube intramolecular junctions

Nature: 402 (6759): 273-276 (1999)

View PDF

1998

S. J. Tans, A. R. M. Verschueren, C. Dekker

Room-temperature transistor based on a single carbon nanotube

Nature: 393 (6680): 49-52 (1998)

View PDF

S.J. Tans, M.H. Devoret, R.J.A. Groeneveld, C. Dekker

Electron-electron correlations in carbon nanotubes

Nature: 394 (6695): 761-764 (1998)

View PDF

Bezryadin, A. R. M. Verschueren, S. J. Tans, C. Dekker

Multiprobe transport experiments on individual single-wall carbon nanotubes

Physics Review Letters: 80 (18): 4036-4039 (1998)

View PDF

J. W. G.Wildoer, L. C. Venema, A. G. Rinzler, R. E. Smalley, C. Dekker

Electronic structure of atomically resolved carbon nanotubes

Nature: 391 (6662): 59-62 (1998)

View PDF

C. Dekker, S.J. Tans, M.H. Devoret, L.J. Geerligs, R.J.A. Groenveld, L. C. Venema, J.W.G. Wildoer, A.R.M. Verschuren, A. Bezryadin, A. Thess, H. Dai, R. A. Smalley

Electronic properties of individual single-wall nanotubes: Transport and STM results

in Molecular Nanostructures (World Scientific), Eds. H. Kuzmany, J. Fink, M. Mehring, and S. Roth, 467-471 (1998): undefined

C.L. Kane, E.J. Mele, R.S. Lee, J.E. Fisher, P. Petit, H. Dai, A. Thess, R.E. Smalley, A.R.M. Verschueren, S.J. Tans, C. Dekker

Temperature dependent resistivity of single-wall carbon nanotubes

Europhysics Letters: 41 (6): 683-688 (1998)

View PDF

L.C. Venema, J.W.G. Wildoer, C. Dekker, A.G. Rinzler, R.E. Smalley

STM atomic resolution images of single-wall carbon nanotubes

Applied Physics A: 66: S153-S155 (1998)

View PDF

1997

J. Liu, H. Dai, J. H. Hafner, D. T. Colbert, R. E. Smalley, S. J. Tans, and C. Dekker

Fullerene crop circles

Nature 385, 780-781 (1997)

S. J. Tans, M. H. Devoret, H. Dai, A. Thess, R. E. Smalley, L. J. Geerligs, and C. Dekker

Individual single-wall nanotubes as quantum wires

Nature 386, 474 (1997)

C. Dekker, S. J. Tans, L. J. Geerligs, A. Bezryadin, J. Wu, and G. Wegner

Towards transport on single molecules: first results on nanofabrication and phthalocyanine polymers

in Atomic and Molecular Wires, eds. C. Joachim and S. Roth (Kluwer Acad. Publ., 1997), p. 129-138

C. Dekker, S.J. Tans, B. Oberndorff, R. Meyer, and L. Venema

STM imaging and spectroscopy of single copperphthalocyanine molecules

Synthetic Metals 84, 853 (1997)

O. C. Mantel, H.S.J. van der Zant, A.J. Steinfort, C. Traeholt, and C. Dekker

Orientation of the charge-density-wave chains in thin films of Rb0.30MoO3

Synthetic Metals 86, 2193 (1997)

S. J. Tans, L.J. Geerligs, C. Dekker, J. Wu, and G. Wegner

Electrical transport in monolayers of phthalocyanine molecular wires and AFM imaging of a single wire bridging two electrodes

Synthetic Metals 84, 733 (1997)

H. S. J. van der Zant, O. C. Mantel, C. P. Heij, and C. Dekker

Photolithographic patterning of the charge-density-wave conductor Rb0.30MoO3

Synthetic Metals 86, 1781 (1997)

O. C. Mantel, H.S.J. van der Zant, A. J. Steinfort, C. Dekker, C. Traeholt, and H. W. Zandbergen

Thin films of the charge-density-wave oxide Rb0.30MoO3 by pulsed-laser deposition

Phys. Rev. B 55, 4817 (1997)

J. Liu, H. Dai, J. H. Hafner, D.T. Colbert, R.E. Smalley, S.J. Tans, C. Dekker

Fullerene crop circles

Nature 385 (6619): 780-781 (1997)

View PDF

S.J. Tans, M.H. Devoret, H. Dai, A. Thess, R.E. Smalley, L.J. Geerligs, C. Dekker

Individual single-wall nanotubes as quantum wires

Nature 386 (6624): 474-477 (1997)

View PDF

C. Dekker, S. J. Tans, L. J. Geerligs, A. Bezryadin, J. Wu, G. Wegner

Towards transport on single molecules: first results on nanofabrication and phthalocyanine polymers

Atomic and Molecular Wires, eds. C. Joachim and S. Roth Kluwer Acad. Publ., 129-138 (1997): undefined

C. Dekker, S. J. Tans, B. Oberndorff, R. Meyer, L. Venema

STM imaging and spectroscopy of single copperphthalocyanine molecules

Synthetic Metals: 84 (1-3): 853-854 (1997)

View PDF

O.C. Mantel, H.S.J. van der Zant, A.J. Steinfort, C. Traeholt, C. Dekker

Orientation of the charge-density-wave chains in thin films of Rb0.30Mo03

Synthetic Metals: 86 (1-3): 2193-2194 (1997)

View PDF

O.C. Mantel, H.S.J. van der Zant, A.J. Steinfort, C. Dekker, C. Traeholt, H.W. Zandbergen

Thin films of the charge-density-wave oxide Rb0.30Mo03 by pulsed-laser depostition

Physical Review B: 55 (7): 4817-4824 (1997)

View PDF

S.J. Tans, L.J. Geerligs, C. Dekker, J. Wu, G. Wegner

Electrical transport in monolayers of phthalocyanine molecular wires and AFM imaging of a single wire bridging two electrodes

Synthetic Metals: 84 (1-3): 733-734 (1997)

View PDF

Bezryadin and C. Dekker

Nanofabrication of electrodes with sub-5 nm spacing for transport experiments on single molecules and metal clusters

Journal of Vacuum Science and Technology B: 15 (4) 793-799 (1997)

View PDF

Bezryadin, C. Dekker, G. Schmid

Electrostatic trapping of single conducting nanoparticles between nanoelectrodes

Applied Physics Letters: 71 (9): 1273-1275 (1997)

View PDF

L.C. Venema, J.W.G. Wildoer, H.L.J. Temminck Tuinstra, C. Dekker, A.G. Rinzler, and R.E. Smalley

Length control of individual carbon nanotubes by nanostructuring with the scanning tunneling microscope

Applied Physics Letters: 71 (18): 2629-2631 (1997)

View PDF

S.J. Tans, L.J. Geerligs, C. Dekker, J. Wu, G. Wegner

Deposition and atomic force microscopy of individual phthalocyanine polymers between nanofabricated electrodes

Journal of Vacuum Science and Technology B: 15 (3): 586-589 (1997)

View PDF

1996

H. S. J. van der Zant, O. C. Mantel, C. Dekker, J. E. Mooij, and C. Traeholt

Thin-film growth of the charge-density-wave oxide Rb0.30MoO3

Appl. Phys. Lett. 68, 3823 (1996)

View PDF

1995

P. J. M. Woltgens, C. Dekker, R. H. Koch, B. W. Hussey, and A. Gupta

Finite-Size Effects on the Vortex-Glass Phase Transition in Thin YBa2Cu3O7 Films

Phys. Rev. B 52, 4536 (1995)

View PDF

1994

P. J. M. Woltgens, C. Dekker, R. H. Koch, B. W. Hussey, and A. Gupta

2D-3D Crossover Effects on the Vortex-Glass Phase Transition in thin YBa2Cu3O7 Films

Physica B 194-196, 1911 (1994)

View PDF

1993

C. Dekker, W. Eidelloth, and R. H. Koch

Low-Temperature Current-Voltage Characteristics of YBa2Cu3O7 Films in a Magnetic Field: Direct Evidence for a Vortex-Glass Phase

Cryogenics 33, 129 (1993)

View PDF

P. J. M. Woltgens, C. Dekker, S. W. A. Gielkens, and H. W. de Wijn

Voltage Noise of YBa2Cu3O7-( Films in the Vortex-Liquid Phase, in Noise in physical systems and 1/f fluctuations

P. H. Handel and A. L. Chung (AIP, New York, 1993), p. 135.

View PDF

P. J. M. Woltgens, C. Dekker, J. Swuste, and H. W. de Wijn

The Superconducting Phase of YBa2Cu3O7 Films in High Magnetic Fields: Vortex Glass or Bose Glass

Phys. Rev. B 48, 16826 (1993)

View PDF

P. J. M. Woltgens, C. Dekker, and H. W. de Wijn

Nonlinear Hall Resistivity in YBa2Cu3O7 Films near the Vortex Glass Transition

Phys. Rev. Lett. 71, 3858 (1993)

View PDF

1992

F. Liefrink, A. J. Scholten, C. Dekker, J. I. Dijkhuis, B. W. Alphenaar, H. van Houten, and C. T. Foxon

Magnetic Field Effects on Switching Noise in a Quantum Point Contact

Phys. Rev. B 46, 15523 (1992)

C. Dekker, W. Eidelloth, and R. H. Koch

Measurement of the Exponent mu in the Low-Temperature Phase of YBa2Cu3O7 Films in a Magnetic Field: Direct Evidence for a Vortex-Glass Phase

Phys. Rev. Lett. 68, 3347 (1992)

C. Dekker, P. J. M. Woltgens, R. H. Koch, B. W. Hussey, and A. Gupta

Absence of a Finite-Temperature Vortex-Glass Phase Transition in Two-Dimensional YBa2Cu3O7 Films

Phys. Rev. Lett. 69, 2717 (1992)

1991

C. Dekker, A. J. Scholten, F. Liefrink, R. Eppenga, H. van Houten, and C. T. Foxon

Spontaneous Resistance Switching and Low-Frequency Noise in Quantum Point Contacts

Phys. Rev. Lett. 66, 2148 (1991)

F. Liefrink, A. J. Scholten, C. Dekker, R. Eppenga, H. van Houten, and C. T. Foxon

Low-Frequency Noise of Quantum Point Contacts in the Ballistic and Quantum Hall Regime

Physica B 175, 213 (1991)

F. Liefrink, A. J. Scholten, C. Dekker, J. I. Dijkhuis, R. Eppenga, H. van Houten, and C. T. Foxon

Low-Frequency Noise in Quantum Point Contacts

in Noise in physical systems and 1/f fluctuations, ed. by T. Musha, S. Sato, and M. Yamamoto (Ohmsha, Tokyo, 1991), p. 363

C. Dekker, R. H. Koch, B. Oh, and A. Gupta

Dimensionality Crossover of the Superconducting-Normal Transition in YBa2Cu3O7 Thin Films both at High Magnetic Field and at Zero Field

Physica C 185-189, 1799 (1991)

1990

A. F. M. Arts, C. Dekker, and H. W. de Wijn

Spin-glass dynamics in the two-dimensional Ising Rb2Cu1-xCoxF4

in Relaxation and Related Topics in Complex Systems, ed. by I. A. Campbell and C. Giovannella (Plenum Press, New York, 1990), p. 23

1989

C. Dekker, A. F. M. Arts, H. W. de Wijn, A. J. van Duyneveldt, and J. A. Mydosh

Activated dynamics in a two-dimensional Ising spin-glass Rb2Cu1-xCoxF4

Phys. Rev. B 40, 11243 (1989)

1988

C. Dekker, A. F. M. Arts, and H. W. de Wijn

Rb2Cu1-xCoxF4, a two-dimensional Ising spin glass

J. Appl. Phys. 63, 4334 (1988)

C. Dekker, A. F. M. Arts, H. W. de Wijn, A. J. van Duyneveldt, and J. A. Mydosh

Activated dynamics in the two-dimensional Ising spin-glass Rb2Cu1-xCoxF4

Phys. Rev. Lett. 61, 1780 (1988)

C. Dekker, A. F. M. Arts, and H. W. de Wijn

Static critical behavior of the two-dimensional Ising spin glass Rb2Cu1-xCoxF4

Phys. Rev. B 38, 8985 (1988).

C. Dekker, A. F. M. Arts, and H. W. de Wijn

Magnetic order in the two-dimensional randomly mixed ferromagnet-antiferromagnet Rb2Cu1-xCoxF4

Phys. Rev. B 38, 11512 (1988)

C. Dekker, A. F. M. Arts, and H. W. de Wijn

Static and dynamic properties of the two-dimensional Ising spin glass Rb2Cu1-xCoxF4

J. Phys. (Paris) 49, C8-1013 (1988)

C. Dekker

Two-dimensional spin glasses

Ph. D. thesis, University of Utrecht

C. Dekker en A. F. M. Arts

Dynamica van spinglazen

Nederlands Tijdschrift voor Natuurkunde B 54, 149 (1988) [in Dutch]

1987

C. Dekker, A. F. M. Arts, H. W. de Wijn, and J. K. Kjems

Breakup of long-range order in the diluted antiferromagnet K2MnxZn1-xF4 in zero magnetic field

Phys. Rev. B 35, 7157 (1987)

1985

B. J. Dikken, C. Dekker, A. F. M. Arts, and H. W. de Wijn

NMR study of local magnetizations in diluted two-dimensional antiferromagnets

Phys. Rev. B 32, 5787 (1985)

C. Dekker, B. J. Dikken, and A. F. M. Arts

Monte Carlo investigation of diluted antiferromagnets in high magnetic fields

Solid State Commun. 54, 887 (1985)